Difference between revisions of "Main Page"

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| [[dssr_block]] is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
 
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Revision as of 11:52, 26 January 2016

Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
New accounts: email jason (dot) vertrees (@) gmail dot com
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) Getting Help
News & Updates
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
Official Release PyMOL v1.8.0 has been released on Nov 18, 2015.
PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship
Official Release PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015.
New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
Older News See Older News.
Did you know...

Edit Keys

===EDITING KEYS ===
These are defaults, which can be redefined.  Note that while
entering text on the command line, some of these control keys take on
text editing functions instead (CTRL - A, E, and K, and DELETE), so
you should clear the command line before trying to edit atoms.

ATOM REPLACEMENT

  CTRL-C    Replace picked atom with carbon   (C)
  CTRL-N    Replace picked atom with nitrogen (N)
  CTRL-O    Replace picked atom with oxygen   (O)
  CTRL-S    Replace picked atom with sulpher  (S)
  CTRL-G    Replace picked atom with hydrogen (H)
  CTRL-F    Replace picked atom with fluorene (F)
  CTRL-L    Replace picked atom with chlorine (Cl)
  CTRL-B    Replace picked atom with bromine  (Br)
  CTRL-I    Replace picked atom with iodine   (I)

ATOM MODIFICATION

  CTRL-J    Set charge on picked atom to -1
  CTRL-K    Set charge on picked atom to +1
  CTRL-D    Remove atom or bond (DELETE works too).
  CTRL-Y    Add a hydrogen to the current atom
  CTRL-R    Adjust hydrogens on atom/bond to match  ..→
A Random PyMOL-generated Cover. See Covers.