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Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
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Gallery | Covers PyMOL Cheat Sheet (PDF) GoogleSearch
News & Updates
Official Release PyMOL, AxPyMOL, and JyMOL v1.7.2 have all been released on August 4, 2014.
Official Release PyMOL, AxPyMOL, and JyMOL v1.7 have all been released today, January 14, 2014.
New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
New Plugin GROMACS_Plugin is a new plugin that ties together PyMOL and GROMACS.
New Software CMPyMOL is a software that interactively visualizes 2D contact maps of proteins in PyMOL.
New Script cgo_arrow draws an arrow between two picked atoms.
Tips & Tricks Instructions for generating movie PDFs using .mpg movies from PyMOL.
Older News See Older News.
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==RUCAP UM-5 tracker==

RUCAP UM-5 tracker is a wireless joystick for view control in PyMol. The code based on project ImmersiveViz.

The script, which is reproduced below, transmits data to ImmersiveViz. ImmersiveViz runs on top of PyMol and adjusts the PyMol screen view in accordance with the position of your eyes in the space in front of the monitor.

Our system contains a head tracking thread which communicates the users position to a PyMol script via a socket. The PyMol script unpacks the message and updates the world respectively. All rotation is done around the virtual origin in PyMol and zoom is also considered.

Operating principle

Tracker RUCAP UM-5 in real time detects the absolute position and orientation of Your head relative to computer monitor. Antenna RU constantly traces the position of emitter CAP and transmits the data to RUCAP UM-5 Service program rucap.dll for further processing. Information from ultrasonic sensors is processed into concrete commands for the PyMol or ..→

A Random PyMOL-generated Cover. See Covers.

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