Difference between revisions of "Main Page"

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| style="padding: 3px 5px 10px 15px;"| ♦ Information about PyMOL and [[Stereo_
 
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|valign="bottom" width="150px" style="padding: 0 20px 20px 0; clear:right;" |[[Image:070920nature.pdf.jpg|125px]] Sample Cover from the [[Covers]] gallery.
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|valign="bottom" width="150px" style="padding: 0 20px 20px 0; clear:right;" |[[Image:080701_h.a.steinberg_biochemie.jpg|125px]] Sample Cover from the [[Covers]] gallery.
 
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| style="padding: 3px 5px 10px 15px;"| ♦ [[Ellipsoids]] representation added for drawing thermal ellipsoids.
 
| style="padding: 3px 5px 10px 15px;"| ♦ [[Ellipsoids]] representation added for drawing thermal ellipsoids.
 
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|valign="bottom" width="150px" style="padding: 0 20px 20px 0" |[[Image:Gm1.png|125px]] Screenshot of [[grid_mode|Grid Mode]] in action.
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|valign="bottom" width="150px" style="padding: 0 20px 20px 0" |[[Image:Group_on2.png|125px]] Screenshot of [[group]] in action.
 
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Revision as of 21:04, 18 December 2008

Welcome to the PyMOL Wiki
We are the community-based support site for the popular molecular visualization program, PyMOL.


New Users
New users are encouraged to join. Feel free to add any appropriate content; make an account and get started!
Quick Links
Table of Contents -- updated! Index of all pages PyMOL Cheat Sheet: PDF | Wiki Page
Tutorials Commands Settings: All | Documented
Script Library Plugins See All Categories
Frequently Asked Questions Gallery | Covers About PyMOL
Track: Bugs Feature Req Support Req
News and Updates (archive)
Wiki
♦ Documented a few more settings. Also, check out the cool, Huge_surfaces page for handling very large objects and representing them as surfaces, in PyMOL.
♦ We got our 2,000,000th page view!
♦ Added links in the table on the Main Page (above) for submitting & tracking bugs and feature reqeuests.
♦ New logo for the wiki. It's DNA. You can easily see the major/minor grooves. If you don't see it, force a reload of the page (CTRL-F5, usually).
♦ New category about PyMOL performance: making the impossible possible, and the difficult easier/faster.
♦ Information about PyMOL and [[Stereo_
080701 h.a.steinberg biochemie.jpg Sample Cover from the Covers gallery.
PyMOL
♦ PyMOL now comes with some builtin examples: look in the examples directory of your source tree.
group command has been added.
♦ The truly awesome grid_mode setting has been added.
Ellipsoids representation added for drawing thermal ellipsoids.
Group on2.png Screenshot of group in action.
Scripts & Plugins
♦ Ever wanted to load all the PDBs in a directory within PyMOL? Now you can load all files in a dir with LoadDir.
PDB Web Services Script -- Example using PyMOL and the PDB Web Services.
LigAlign -- Ligand-based active site alignment and comparison.
♦ Added a simple script for finding the center or mass, or moving a selection to the origin.
COLORAMA-screenshot.jpg Screenshot of Colorama.