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- 19:40, 29 August 2011 diff hist +2,111 Rotkit →Introduction
- 19:13, 29 August 2011 diff hist -7,291 Rotkit →The dye .pdb file
- 19:10, 29 August 2011 diff hist +7,462 Rotkit
- 19:09, 29 August 2011 diff hist +11,014 N Rotkit Created page with "== Author == This pymol script is made by Troels Emtekær Linnet == Introduction == == Example of use == === The dye pdb === === The testrotkit.pml file === <source lang="py..."
- 07:17, 29 August 2011 diff hist -752 Propka →Python Code
- 07:16, 29 August 2011 diff hist +811 Propka →Python Code
- 12:04, 24 August 2011 diff hist +485 Propka →Mutagenesis analysis
- 09:59, 24 August 2011 diff hist +2,254 FindSurfaceResidues →The Code
- 09:56, 24 August 2011 diff hist 0 N File:Surfaceatoms.png current
- 08:42, 24 August 2011 diff hist +107 Propka →Mutagenesis analysis
- 06:30, 24 August 2011 diff hist +2 Forster distance calculator →How to run the script
- 06:25, 24 August 2011 diff hist +383 Main Page
- 06:14, 24 August 2011 diff hist +89 Forster distance calculator →How the script works
- 05:54, 24 August 2011 diff hist +16,937 Forster distance calculator
- 05:40, 24 August 2011 diff hist +459 Forster distance calculator →How the script works
- 05:36, 24 August 2011 diff hist 0 N File:3-ALEXA488Emi-ALEXA633Exi-overlap-integral.png current
- 05:35, 24 August 2011 diff hist 0 N File:2-ALEXA488Emi-ALEXA633Exi-overlap-normalized-spectre.png current
- 05:35, 24 August 2011 diff hist 0 N File:1-ALEXA488Emi-ALEXA633Exi-overlap-all-spectre.png current
- 05:31, 24 August 2011 diff hist 0 N File:1-ALEXA488Emi-ALEXA633Exi-overlap-all-spectre.pdf current
- 05:30, 24 August 2011 diff hist +554 Forster distance calculator →How the script works
- 05:15, 24 August 2011 diff hist +2,825 Forster distance calculator
- 04:28, 24 August 2011 diff hist +2,821 N Forster distance calculator Created page with "== Author == This pymol script is made by Troels Emtekær Linnet<br /> == Introduction == This script can be handsome, if one is working with Förster resonance energy transfer ..."
- 13:31, 23 August 2011 diff hist +36 Propka →Mutagenesis analysis
- 13:24, 23 August 2011 diff hist +46 Propka →Mutagenesis analysis
- 13:19, 23 August 2011 diff hist +53 Propka →Mutagenesis analysis
- 12:52, 23 August 2011 diff hist +1,054 Propka →Mutagenesis analysis
- 10:30, 23 August 2011 diff hist -27 Displacementmap →Example
- 10:29, 23 August 2011 diff hist -517 Displacementmap →Text output
- 10:26, 23 August 2011 diff hist +151 Displacementmap →dispmap.py
- 10:24, 23 August 2011 diff hist -3,352 Displacementmap
- 07:55, 22 August 2011 diff hist +3 Propka →Known bugs
- 07:54, 22 August 2011 diff hist 0 Propka
- 07:49, 22 August 2011 diff hist +390 Propka →Mutagenesis analysis
- 07:44, 22 August 2011 diff hist +1,269 Propka →Input paramaters
- 06:58, 22 August 2011 diff hist +301 Propka →Known bugs
- 06:38, 22 August 2011 diff hist 0 Propka →ScriptVersion
- 06:37, 22 August 2011 diff hist +219 Propka →Python Code
- 06:30, 22 August 2011 diff hist +274 Propka →Known bugs
- 05:40, 22 August 2011 diff hist +81 Propka →Changelog
- 04:32, 22 August 2011 diff hist +41 Propka →Changelog
- 04:27, 22 August 2011 diff hist 0 Propka →ScriptVersion
- 04:26, 22 August 2011 diff hist +619 Propka
- 04:22, 22 August 2011 diff hist +96 Propka →Changelog
- 04:02, 22 August 2011 diff hist +40 Propka →Changelog
- 03:50, 22 August 2011 diff hist +91 Propka →Changelog
- 03:48, 22 August 2011 diff hist +504 Propka →Changelog
- 09:59, 21 August 2011 diff hist +133 Propka →Python Code
- 08:40, 21 August 2011 diff hist 0 Propka →ScriptVersion
- 08:39, 21 August 2011 diff hist +2,912 Propka →Python Code
- 08:29, 21 August 2011 diff hist -740 Propka →Example Pymol Script
- 08:23, 21 August 2011 diff hist -19 Displacementmap
- 08:21, 21 August 2011 diff hist +54 ColorByDisplacement →Acknowledgement
- 06:04, 21 August 2011 diff hist +341 Propka →Introduction
- 05:32, 21 August 2011 diff hist +43 Propka →Changelog
- 05:30, 21 August 2011 diff hist +276 Propka →Changelog
- 04:55, 21 August 2011 diff hist -4 Propka →Known bugs
- 18:26, 20 August 2011 diff hist +99 Propka →Changelog
- 18:24, 20 August 2011 diff hist +180 Propka →Known bugs
- 18:17, 20 August 2011 diff hist +66 Propka →Examples
- 18:13, 20 August 2011 diff hist 0 N File:Resultslog.png current
- 18:09, 20 August 2011 diff hist +38 N File:Pymolpropkamenu.png The easy click menu from propka script current
- 18:07, 20 August 2011 diff hist 0 N File:Propka1HP1-ZN.png current
- 18:05, 20 August 2011 diff hist +27 N File:Propka1HP1-ATP.png propka on 1HP1, zoom on ATP current
- 18:03, 20 August 2011 diff hist +14 N File:Propka1HP1.png propka on 1HP1 current
- 17:58, 20 August 2011 diff hist +14 N File:Propka4INS.png propka on 4INS current
- 17:52, 20 August 2011 diff hist -42 Propka →Examples
- 17:51, 20 August 2011 diff hist +1 Propka →Examples
- 17:50, 20 August 2011 diff hist 0 N File:Propkamenu3.png current
- 17:44, 20 August 2011 diff hist +1 Propka →Examples
- 17:43, 20 August 2011 diff hist 0 N File:Propka1hp13zoom2.png current
- 17:41, 20 August 2011 diff hist 0 File:Pkavalues.png uploaded a new version of "File:Pkavalues.png": Reverted to version as of 21:39, 20 August 2011 current
- 17:39, 20 August 2011 diff hist 0 File:Pkavalues.png uploaded a new version of "File:Pkavalues.png": Reverted to version as of 21:38, 20 August 2011
- 17:39, 20 August 2011 diff hist 0 File:Pkavalues.png uploaded a new version of "File:Pkavalues.png": Reverted to version as of 21:37, 20 August 2011
- 17:38, 20 August 2011 diff hist 0 File:Pkavalues.png uploaded a new version of "File:Pkavalues.png"
- 17:37, 20 August 2011 diff hist 0 File:Pkavalues.png uploaded a new version of "File:Pkavalues.png": Reverted to version as of 21:37, 20 August 2011
- 17:37, 20 August 2011 diff hist 0 File:Pkavalues.png uploaded a new version of "File:Pkavalues.png": Reverted to version as of 21:36, 20 August 2011
- 17:37, 20 August 2011 diff hist 0 File:Pkavalues.png uploaded a new version of "File:Pkavalues.png"
- 17:36, 20 August 2011 diff hist 0 File:Pkavalues.png uploaded a new version of "File:Pkavalues.png"
- 17:35, 20 August 2011 diff hist 0 File:Menu.png uploaded a new version of "File:Menu.png": Reverted to version as of 21:35, 20 August 2011 current
- 17:35, 20 August 2011 diff hist 0 File:Menu.png uploaded a new version of "File:Menu.png"
- 17:35, 20 August 2011 diff hist 0 File:Menu.png uploaded a new version of "File:Menu.png"
- 17:34, 20 August 2011 diff hist 0 File:Propka1hp12.png uploaded a new version of "File:Propka1hp12.png" current
- 17:33, 20 August 2011 diff hist 0 File:Propka4ins2.png uploaded a new version of "File:Propka4ins2.png" current
- 17:24, 20 August 2011 diff hist +188 Propka
- 15:33, 20 August 2011 diff hist +720 Propka →Changelog
- 15:22, 20 August 2011 diff hist -2 Propka →Changelog
- 15:22, 20 August 2011 diff hist +362 Propka →Changelog
- 14:51, 20 August 2011 diff hist 0 Propka →ScriptVersion
- 14:50, 20 August 2011 diff hist +11,591 Propka →Python Code
- 14:48, 20 August 2011 diff hist -28 Propka →Input paramaters
- 14:47, 20 August 2011 diff hist +1,793 Propka →Example Pymol Script
- 14:45, 20 August 2011 diff hist +8 Propka →Introduction
- 14:44, 20 August 2011 diff hist -10 Propka →Introduction
- 14:43, 20 August 2011 diff hist +84 Propka →Introduction
- 14:41, 20 August 2011 diff hist -208 Propka
- 14:32, 20 August 2011 diff hist +473 Propka →Introduction
- 14:25, 20 August 2011 diff hist +70 Propka →Acknowledgement
- 17:08, 16 August 2011 diff hist +236 Propka →Changelog
- 17:05, 16 August 2011 diff hist +89 Propka →Python Code
- 17:03, 16 August 2011 diff hist 0 Propka →Example Pymol Script
- 16:27, 16 August 2011 diff hist 0 Propka →ScriptVersion
- 16:27, 16 August 2011 diff hist +1 Propka →Python Code
- 13:32, 16 August 2011 diff hist +212 Propka →Python Code
- 12:16, 16 August 2011 diff hist 0 Propka →Changelog
- 12:15, 16 August 2011 diff hist +195 Propka →Changelog
- 12:13, 16 August 2011 diff hist +304 Propka →ScriptVersion
- 12:06, 16 August 2011 diff hist +1,884 Propka →Python Code
- 12:01, 16 August 2011 diff hist -2,129 Propka Undo revision 9277 by Tlinnet (talk)
- 11:57, 16 August 2011 diff hist -198 Propka Undo revision 9278 by Tlinnet (talk)
- 11:56, 16 August 2011 diff hist +198 Propka Undo revision 9277 by Tlinnet (talk)
- 11:54, 16 August 2011 diff hist +2,129 Propka →Python Code
- 05:56, 16 August 2011 diff hist +20 Propka
- 05:43, 16 August 2011 diff hist +32 Propka →Acknowledgement
- 15:37, 15 August 2011 diff hist +271 Propka →Python Code
- 15:24, 15 August 2011 diff hist +34 Propka →Examples
- 12:32, 15 August 2011 diff hist +183 Propka →Example Pymol Script
- 12:28, 15 August 2011 diff hist -159 Propka →Python Code
- 06:13, 15 August 2011 diff hist +300 Main Page
- 06:07, 15 August 2011 diff hist -22 Propka →Examples
- 06:05, 15 August 2011 diff hist +42 N File:Pkavalues.png The atoms are labelled with the pka values
- 06:04, 15 August 2011 diff hist -6 Propka →Examples
- 06:03, 15 August 2011 diff hist 0 File:Menu.png uploaded a new version of "File:Menu.png"
- 05:59, 15 August 2011 diff hist +30 Propka →Examples
- 05:56, 15 August 2011 diff hist +254 Propka →Examples
- 05:55, 15 August 2011 diff hist +38 N File:Menu.png Example of menu when running propka.py
- 05:54, 15 August 2011 diff hist +111 N File:Propka1hp12.png fetch 1hp1, async=0 propka molecule=1hp1, chain=A, resi=308.513, resn=CYS, logtime=_, verbose=no, showresult=no
- 05:54, 15 August 2011 diff hist +159 N File:Propka4ins2.png Example of propka.py script. run ./propka.py fetch 4ins, async=0 propka molecule=4ins, chain=*, resi=19.20, resn=ASP.TYR, logtime=_, verbose=yes, showresult=no
- 05:37, 15 August 2011 diff hist +22 Propka →Python Code
- 05:33, 15 August 2011 diff hist +33 Propka
- 05:31, 15 August 2011 diff hist +2,232 Propka →Python Code
- 05:30, 15 August 2011 diff hist +127 Propka →Python Code
- 05:27, 15 August 2011 diff hist +219 Propka →Example Pymol Script
- 17:02, 14 August 2011 diff hist +243 Propka →Examples
- 17:00, 14 August 2011 diff hist +12 Propka →Introduction
- 16:57, 14 August 2011 diff hist -6 Propka →Acknowledgement
- 16:56, 14 August 2011 diff hist +1 Propka →Acknowledgement
- 16:54, 14 August 2011 diff hist +96 Propka →Acknowledgement
- 16:52, 14 August 2011 diff hist -17 Propka →Python Code
- 16:51, 14 August 2011 diff hist +15 Propka →Example Pymol Script
- 16:46, 14 August 2011 diff hist -7 Propka →Example Pymol Script
- 16:43, 14 August 2011 diff hist +5 Propka →Examples
- 16:42, 14 August 2011 diff hist +366 Propka →Examples
- 16:37, 14 August 2011 diff hist +151 N File:Results log.png Example of the logfile output from propka.py script. The inputs are saved to the log file, with the interesting residues specified with resi= and resn= current
- 16:30, 14 August 2011 diff hist -276 Propka →Examples
- 16:25, 14 August 2011 diff hist +46 File:Propka1hp1.png current
- 16:24, 14 August 2011 diff hist +111 N File:Propka1hp1.png fetch 1hp1, async=0 propka molecule=1hp1, chain=A, resi=308.513, resn=CYS, logtime=_, verbose=no, showresult=no
- 16:21, 14 August 2011 diff hist -14 File:Propka4ins.png current
- 16:20, 14 August 2011 diff hist +20 File:Propka4ins.png
- 16:19, 14 August 2011 diff hist +159 N File:Propka4ins.png Example of propka.py script. run ./propka.py fetch 4ins, async=0 propka molecule=4ins, chain=*, resi=19.20, resn=ASP.TYR, logtime=_, verbose=yes, showresult=no
- 16:13, 14 August 2011 diff hist +3 Propka
- 16:12, 14 August 2011 diff hist +3 Propka →Dependency of python module: mechanize
- 16:11, 14 August 2011 diff hist +717 Propka
- 16:07, 14 August 2011 diff hist +30,088 Propka
- 15:45, 14 August 2011 diff hist +8 N Propka Created page with "Oprettet"
- 14:48, 4 August 2011 diff hist +43 Displacementmap →Output
- 14:47, 4 August 2011 diff hist +37 Displacementmap →Output
- 14:46, 4 August 2011 diff hist 0 N File:O5NT-C5NT-CA-dist-backbone.png current
- 14:45, 4 August 2011 diff hist +388 Displacementmap →Text output
- 14:43, 4 August 2011 diff hist +577 Displacementmap →Pymol script file
- 14:41, 4 August 2011 diff hist -13 Displacementmap →Author
- 14:41, 4 August 2011 diff hist +1,750 Displacementmap →DisplacementMap.py
- 11:36, 22 February 2011 diff hist -4 Caver2
- 07:57, 4 February 2011 diff hist +445 Color h →The Code
- 06:46, 4 February 2011 diff hist +118 Color h →Overview
- 06:45, 4 February 2011 diff hist +1,685 Color h →The Code
- 06:01, 3 February 2011 diff hist 0 Autodock plugin →Installation
- 06:00, 3 February 2011 diff hist +104 Autodock plugin
- 17:40, 2 February 2011 diff hist +3,574 Displacementmap →DisplacementMap.py
- 17:39, 2 February 2011 diff hist +20 Displacementmap →Pymol script file
- 17:38, 2 February 2011 diff hist +635 Displacementmap →Text output
- 17:37, 2 February 2011 diff hist +20 Displacementmap →Example
- 15:03, 7 January 2011 diff hist +15 GetRotationMatrix →About the Kabsch algorithm current
- 15:03, 7 January 2011 diff hist +345 N GetRotationMatrix Created page with '=== Introduction === Under construction!!! === About the Kabsch algorithm === For references, see: WOLFGANG KABSCH, A solution for the best rotation to relate two sets of vector…'
- 12:18, 7 January 2011 diff hist +210 Displacementmap →Pymol script file
- 12:17, 7 January 2011 diff hist 0 Displacementmap →Output
- 12:17, 7 January 2011 diff hist -43 Displacementmap →Text output
- 12:16, 7 January 2011 diff hist +34 Displacementmap →Output
- 12:15, 7 January 2011 diff hist +130 N File:O5NT-C5NT-CA-dist-menu.png DisplacementMap parses best suggestions back to pymol as new objects. Command used: DisplacementMap O5NT, C5NT, CA, 40.0, 15.0, 10 current
- 12:14, 7 January 2011 diff hist -4 Displacementmap →Output
- 12:12, 7 January 2011 diff hist -10 Displacementmap →Output
- 12:11, 7 January 2011 diff hist +130 N File:O5NT-C5NT-CA-dist.png DisplacementMap parses best suggestions back to pymol as new objects. Command used: DisplacementMap O5NT, C5NT, CA, 40.0, 15.0, 10 current
- 12:07, 7 January 2011 diff hist -10 Displacementmap →Output
- 12:07, 7 January 2011 diff hist -5 Displacementmap →Example
- 12:07, 7 January 2011 diff hist +95 N File:O5NT-C5NT-CA-dist-gnuplot.png DisplacementMap gnuplot of data-matrix. Command: DisplacementMap O5NT, C5NT, CA, 40.0, 15.0, 10 current
- 12:03, 7 January 2011 diff hist +79 Displacementmap →Example
- 12:02, 7 January 2011 diff hist +325 Displacementmap →Text output
- 11:58, 7 January 2011 diff hist 0 Displacementmap →Output
- 11:58, 7 January 2011 diff hist 0 Displacementmap →Output
- 11:57, 7 January 2011 diff hist -1 Displacementmap →Output
- 11:37, 7 January 2011 diff hist +6 Displacementmap →References
- 11:34, 7 January 2011 diff hist 0 Displacementmap →Instructions
- 03:56, 7 January 2011 diff hist +12 ColorByDisplacement →Code
- 03:55, 7 January 2011 diff hist +80 ColorByDisplacement →Bug in code
- 18:42, 6 January 2011 diff hist -3 ColorByDisplacement →Introduction
- 18:33, 6 January 2011 diff hist +230 ColorByDisplacement →Examples
- 18:33, 6 January 2011 diff hist -6 ColorByDisplacement →Python Code
- 18:29, 6 January 2011 diff hist 0 ColorByDisplacement →Bug in code
- 18:28, 6 January 2011 diff hist +242 ColorByDisplacement
- 18:25, 6 January 2011 diff hist +110 ColorByDisplacement →Python Code: Found a bug in spectrum command. Boolean works different for different versions of pymol
- 10:22, 6 January 2011 diff hist +14 ColorByDisplacement →Python Code
- 10:19, 6 January 2011 diff hist +307 ColorByDisplacement →Python Code: Version 2 implemented, due to a minor typo in spectrum command. Now white is working.
- 10:18, 6 January 2011 diff hist -72 ColorByDisplacement →Examples
- 10:17, 6 January 2011 diff hist +63 ColorByDisplacement →Code: Version 2 implemented
- 18:43, 5 January 2011 diff hist +49 Displacementmap
- 18:33, 5 January 2011 diff hist +1 ColorByDisplacement →Python Code
- 18:22, 5 January 2011 diff hist -22 ColorByDisplacement →Python Code
- 18:18, 5 January 2011 diff hist +153 ColorByDisplacement
- 18:16, 5 January 2011 diff hist -145 ColorByDisplacement
- 18:14, 5 January 2011 diff hist +4 ColorByDisplacement
- 18:08, 5 January 2011 diff hist +307 Main Page
- 18:01, 5 January 2011 diff hist +107 ColorByDisplacement
- 17:59, 5 January 2011 diff hist -1 ColorByDisplacement
- 17:58, 5 January 2011 diff hist +6 ColorByDisplacement
- 17:58, 5 January 2011 diff hist +120 ColorByDisplacement
- 17:56, 5 January 2011 diff hist -10 ColorByDisplacement
- 17:55, 5 January 2011 diff hist +1,142 ColorByDisplacement
- 17:53, 5 January 2011 diff hist -409 ColorByDisplacement
- 17:48, 5 January 2011 diff hist +8,546 ColorByDisplacement
- 17:44, 5 January 2011 diff hist +70 N File:ColorByDisplacement-All-2.png ColorByDisplacementAll used on 5'-nucleotidase (pdb:1HP1 and pdb:1HPU) current
- 17:43, 5 January 2011 diff hist +70 N File:ColorByDisplacement-All-1.png ColorByDisplacementAll used on 5'-nucleotidase (pdb:1HP1 and pdb:1HPU) current
- 17:29, 5 January 2011 diff hist +69 N File:ColorByDisplacement-CA-2.png ColorByDisplacementCA used on 5'-nucleotidase (pdb:1HP1 and pdb:1HPU) current
- 17:28, 5 January 2011 diff hist +67 N File:ColorByDisplacement-CA-1.png ColorByDisplacement used on 5'-nucleotidase (pdb:1HP1 and pdb:1HPU) current
- 16:20, 4 January 2011 diff hist +11 ColorByDisplacement
- 16:16, 4 January 2011 diff hist +7,763 N ColorByDisplacement Created page with '== Acknowledgement == This script is based on the scaffold from ColorByRMSD. Peace love and harmomy goes to Shivender Shandilya and Jason Vertrees. == Introduction == This scrip…'
- 07:59, 27 December 2010 diff hist +1 Displacementmap →References
- 07:59, 27 December 2010 diff hist +44 Displacementmap →References: Update of ref
- 07:56, 27 December 2010 diff hist +30 Displacementmap Update of naming
- 20:02, 26 December 2010 diff hist +355 Main Page New Script. DisplacementMap
- 19:48, 26 December 2010 diff hist -4 Displacementmap →DisplacementMap.py
- 19:47, 26 December 2010 diff hist -1 Displacementmap →References
- 19:46, 26 December 2010 diff hist +589 Displacementmap →References
- 19:33, 26 December 2010 diff hist +620 Displacementmap
- 19:22, 26 December 2010 diff hist +1,085 Displacementmap →Text output
- 19:19, 26 December 2010 diff hist +33 Displacementmap
- 19:18, 26 December 2010 diff hist +1,266 Displacementmap
- 19:16, 26 December 2010 diff hist +1 Displacementmap →Output
- 19:16, 26 December 2010 diff hist -3 Displacementmap →Output
- 19:15, 26 December 2010 diff hist +3 Displacementmap →Output
- 19:15, 26 December 2010 diff hist +101 Displacementmap →Output
- 19:14, 26 December 2010 diff hist 0 File:O5NT-1HP1-A-C5NT-1HPU-C-CA-dist-map.png uploaded a new version of "File:O5NT-1HP1-A-C5NT-1HPU-C-CA-dist-map.png": DisplacementMap gnuplot of data-matrix current
- 19:12, 26 December 2010 diff hist +48 Displacementmap →Output
- 19:12, 26 December 2010 diff hist +38 N File:O5NT-1HP1-A-C5NT-1HPU-C-CA-dist-map.png DisplacementMap gnuplot of data-matrix
- 19:11, 26 December 2010 diff hist +23 Displacementmap →Output
- 19:09, 26 December 2010 diff hist +36 Displacementmap
- 19:07, 26 December 2010 diff hist +28 N File:O5NT-1HP1-A-C5NT-1HPU-C-CA-dist.png DisplacementMap pymol output current
- 18:56, 26 December 2010 diff hist +176 Displacementmap
- 18:53, 26 December 2010 diff hist +124 Displacementmap
- 18:50, 26 December 2010 diff hist +1 Displacementmap
- 18:49, 26 December 2010 diff hist +17,292 N Displacementmap First description
- 18:19, 26 December 2010 diff hist +398 Category:Structural Biology Scripts