WFMesh

###############################################
#  File:          WFObj.py
#  Author:        Dan Kulp
#  Creation Date: 5/13/05
#
#  Notes:
#  Create openGL objects from a wavefront (obj) file
###############################################
 
import os
import string
import re
import math
from pymol.opengl.gl import *
from pymol.callback import Callback
 
 
# Wrapper Function, to create a given WFObj with a specific name (flip = 1 if OpenFX + Crossroads used)
def createWFObj(file, name,translate=[0,0,0],flip=0):
	obj = WFMesh(file,translate,flip)
	cmd.load_callback(obj,name)
 
 
# Class for Wavefront Mesh
class WFMesh(Callback):
 
    verts = []        # list of vertices
    polys = []        # list of poylgons
    pnorms = []       # list of polynomal normals
    vnorms = {}       # dict. of vertex normals
    vavenorms = []    # list of vertex normals, redundant -- I'm far froma python pro.
    sections = {}     # list of sections of mesh
 
    # Read mesh into memory
    def readOBJ(self,file):
        if os.path.exists(file):
	    input = open(file,'r')
	    for line in input:
		dat = re.split("\s+", line)
 
		# Find vertex line
		if line[0] == 'v' and line[1] != 't' and line[1] != 'n':    self.verts.append([dat[1],dat[2],dat[3]])
 
		# Find polygon line
       	        if line[0] == 'f':    self.polys.append([dat[1],dat[2],dat[3]])
 
		# Find section line
		if line[0] == 'g':    self.sections[len(self.polys)] = dat[1] 
 
 
    # Compute the normals for each polygon and each vertex   		
    def computeNorms(self):
 
	# Compute norms for each polygon
	for p in self.polys:
		v12 = [float(self.verts[int(p[1])-1][0]) - float(self.verts[int(p[0])-1][0]),\
		       float(self.verts[int(p[1])-1][1]) - float(self.verts[int(p[0])-1][1]),\
		       float(self.verts[int(p[1])-1][2]) - float(self.verts[int(p[0])-1][2]) \
		      ]
 
		v13 = [float(self.verts[int(p[2])-1][0]) - float(self.verts[int(p[0])-1][0]),\
		       float(self.verts[int(p[2])-1][1]) - float(self.verts[int(p[0])-1][1]),\
		       float(self.verts[int(p[2])-1][2]) - float(self.verts[int(p[0])-1][2]) \
		      ]	
 
		# Compute poly normal
		polynorm = self.cross(v12,v13) 
		norm = self.normalize(polynorm)
 
 
		# Files created by OpenFX, Crossroads combination need have their normals flipped	
		if self.flip:
			norm[0] = -norm[0]
			norm[1] = -norm[1]
			norm[2] = -norm[2]
 
		# Append poly norm to polygonal norm array
		self.pnorms.append(norm)
 
		# Add norm to each vertexes norm..
	        try:
		    self.vnorms[int(p[0])-1] = [float(self.vnorms[int(p[0])-1][0]) + norm[0],
					    float(self.vnorms[int(p[0])-1][1]) + norm[1],
					    float(self.vnorms[int(p[0])-1][2]) + norm[2]
					   ]
		except:
		    self.vnorms[int(p[0])-1] = [norm[0],norm[1],norm[2]]
 
	        try:					   
		    self.vnorms[int(p[1])-1]  = [float(self.vnorms[int(p[1])-1][0]) + norm[0],
					    float(self.vnorms[int(p[1])-1][1]) + norm[1],
					    float(self.vnorms[int(p[1])-1][2]) + norm[2]
					   ]
		except:
		    self.vnorms[int(p[1])-1] = [norm[0],norm[1],norm[2]]
 
		try:
		    self.vnorms[int(p[2])-1]  = [float(self.vnorms[int(p[1])-1][0]) + norm[0],
					    float(self.vnorms[int(p[1])-1][1]) + norm[1],
					    float(self.vnorms[int(p[1])-1][2]) + norm[2]
					   ]
		except:
		    self.vnorms[int(p[2])-1] = [norm[0],norm[1],norm[2]]
 
 
        # Average out each vnorm..
	index = 0
      	for v in self.vnorms.values():
		self.vavenorms.append([v[0]/4, v[1]/4, v[2]/4])		
		index += 1
 
    # Utility function to normalize a given vector
    def normalize(self,v):
	mag = v[0]*v[0]+v[1]*v[1]+v[2]*v[2]
	if mag <= 0:
  	    mag = 1
	else:
	    mag = math.sqrt(mag)
 
	return [v[0]/mag, v[1]/mag,v[2]/mag]
 
    # Utility cross product function
    def cross(self,v1,v2):
	x = 0
	y = 1
	z = 2
 
	return [v1[y]*v2[z] - v1[z]*v2[y],\
		v1[z]*v2[x] - v1[x]*v2[z],\
		v1[x]*v2[y] - v1[y]*v2[x]
		]
 
    # Constructor
    def __init__(self, file,translate=[0,0,0],flip=0):
        self.verts = []
        self.polys = [] 
        self.pnorms = []
        self.vnorms = {}
        self.vavenorms = []
	self.translate = translate
	self.flip      = flip 
 
        print "Read in file: "+str(file)
	self.readOBJ(file)
	print "Done reading in WFMesh, now compute norms"
	self.computeNorms()
	print "Done computing norms, now display WFMesh"
 
    # Draw Function
    def __call__(self):
 
	glColorMaterial(GL_FRONT, GL_DIFFUSE);	
        glEnable(GL_COLOR_MATERIAL);
	glShadeModel(GL_SMOOTH);
 
	# Color Everything grey
        glColor3f(0.5,0.5,0.5);
 
	index = 0
	glPushMatrix()
	glTranslated(self.translate[0],self.translate[1],self.translate[2])
	for p in self.polys:
		glBegin(GL_POLYGON)
		glNormal3f(float(self.pnorms[index][0]),float(self.pnorms[index][1]),float(self.pnorms[index][2]))
 
		for i in range(0,len(p)):
			glVertex3f(float(self.verts[int(p[i])-1][0]),float(self.verts[int(p[i])-1][1]),float(self.verts[int(p[i])-1][2]))
 
			# Vertex Normals - not computed correctly, so commented out for now
#			norm = self.vnorms[int(p[i])-1]
#			glNormal3f(float(norm[0]),float(norm[1]),float(norm[2]))
		glEnd()
		index += 1
	glPopMatrix()
 
 
 
 
 
cmd.extend("createWFObj", createWFObj)

Category: Script Library