Difference between revisions of "Stick radius"
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You can do something like below | You can do something like below | ||
<source lang="python"> | <source lang="python"> | ||
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| + | To set on the entire object | ||
| + | |||
set stick_radius=0.12 | set stick_radius=0.12 | ||
| + | |||
| + | OR | ||
| + | |||
| + | create myObj, <selection> | ||
| + | |||
| + | Ex : create myObj, hetatm | ||
| + | |||
| + | set stick_radius,0.2,myObj | ||
| + | |||
| + | |||
</source> | </source> | ||
Latest revision as of 02:00, 2 September 2009
Overview
This setting affects the radius of sticks in the sticks representation. Default scale is set to 0.25.
In newer versions of PyMOL, one may set the Stick_radius on a per-bond basis. So, you can set for example, the radius of only selected bonds if you want. This is done through the Set_bond command.
stick_radius set to 0.05
stick_radius set to the default 0.25
stick_radius set to 0.85
Syntax
set_bond stick_radius, ''size'', selection
where,
- size can be any float number. Using 0.25 (default value) is usually appropriate for most representations, although 0.15 migh be preferred for comparing closely related structures, e.g., conformers.
Note:
set_bond stick_radius
by itself will revert to 1.00.
If the above commands do not work
You can do something like below
To set on the entire object
set stick_radius=0.12
OR
create myObj, <selection>
Ex : create myObj, hetatm
set stick_radius,0.2,myObj