Difference between revisions of "Show hydrophobics"
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(PyMOL script to display hydrophobic sidechains) |
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| (3 intermediate revisions by 3 users not shown) | |||
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| + | <source lang="python"> | ||
| + | # | ||
| + | # | ||
# | # | ||
# Show side chain sticks for hydrophobic residues | # Show side chain sticks for hydrophobic residues | ||
| Line 18: | Line 21: | ||
color orange,hydrophobes | color orange,hydrophobes | ||
disable hydrophobes | disable hydrophobes | ||
| − | set cartoon_smooth_loops,0 | + | set cartoon_smooth_loops,0</source> |
| + | |||
| + | [[Category:Script_Library|Show Hydrophobics]] | ||
| + | [[Category:Biochemical_Scripts]] | ||
Latest revision as of 08:48, 30 April 2009
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# Show side chain sticks for hydrophobic residues
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# (script for PyMol)
# Tom Stout, 08/05/2004
#
mstop
dss
hide all
#zoom all
#orient
show cartoon,all
color gray,all
select hydrophobes,(resn ala+gly+val+ile+leu+phe+met)
show sticks, (hydrophobes and (!name c+n+o))
color orange,hydrophobes
disable hydrophobes
set cartoon_smooth_loops,0