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News & Updates
Official Release PyMOL v1.8.2 has been released on April 20, 2016.
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
Official Release PyMOL v1.8.0 has been released on Nov 18, 2015.
PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship
Official Release PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015.
New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
Older News See Older News.
Did you know...

Stick ball ratio

== Overview ==

The setting "stick_ball_ratio" controls the relative ratio between the radius of sticks connecting bonded atoms and the radius of the atom spheres. Note that simply setting "stick_ball, on" will result in balls with the same radius as the sticks and so will appear only slightly different (the joins will be smoother). Changing the stick_ball_ratio without setting "stick_ball, on" will -- obviously -- have no apparent effect.

Settings

set stick_ball_ratio, 1.5

Related

set stick_ball, on   # displays atoms as balls joined by sticks
set stick_ball, off  # displays only connected sticks

Examples

Open the images to actually see the details!

A Random PyMOL-generated Cover. See Covers.