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News & Updates Official Release PyMOL v2.3 has been released on February 11, 2019. POSF New PyMOL fellows announced for 2018-2019 Tutorial Plugins Tutorial updated for PyQt5 New Plugin ProBiS H2O is a new plugin for identification of conserved waters in protein structures. Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll! Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons Older News See Older News.

Did you know... TMalign Type Python Module Download tmalign.py Author(s) Thomas Holder License BSD This code has been put under version control in the project Pymol-script-repo Included in psico This command or function is available from psico, which is a PyMOL extension. Module psico.fitting tmalign is a python module (or script) that provides wrappers to TMalign, TMscore and MMalign. The executables can be downloaded from http://zhanglab.ccmb.med.umich.edu/TM-align/ and should be saved to any directory in PATH. The module also provides the command alignwithanymethod which is useful to quickly test different alignment methods (with their respective default values). Installation All dependencies are available from Anaconda Cloud: conda install -c schrodinger pymol conda install -c schrodinger pymol-psico conda install -c speleo3 tmalign Usage tmalign mobile, target [, args [, exe [, ter [, transform [, object ]]]]] tmscore and mmalign usage is equivalent. alignwithanymethod mobile, target [, methods ] Examples <syntaxhighli ..→

A Random PyMOL-generated Cover. See Covers.