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News & Updates Official Release PyMOL v2.5 has been released on May 10, 2021. Python 3 New Python 3 compatibility guide for scripts and plugins POSF New PyMOL fellowship announced for 2022-2023 Tutorial Plugins Tutorial updated for PyQt5 New Plugin PICv is a new plugin for clustering protein-protein interactions and visualization with available data from PDBe Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll! Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons Older News See Older News.

Did you know... Theseus Included in psico This command or function is available from psico, which is a PyMOL extension. Module psico.fitting theseus is a wrapper for the theseus program for maximum likelihood superpositioning of macromolecular structures. It produces results very similar to xfit. Installation For Linux and macOS, all dependencies are available from Anaconda Cloud: conda install -c schrodinger pymol conda install -c schrodinger pymol-psico conda install -c schrodinger theseus Usage Superpose two objects: theseus mobile, target [, match [, cov [, cycles [, mobile_state [, target_state [, exe [, preserve ]]]]]]] Ensemble-fit states of a multi-state object: intra_theseus selection [, state [, cov [, cycles [, exe [, preserve ]]]]] Arguments mobile = string: atom selection for mobile atoms target = string: atom selection for target atoms match = string: in, like, align, none or the name of an alignment object (see local_rms help for details) {default: align} cov = 0/1: 0 is variance ..→

A Random PyMOL-generated Cover. See Covers.