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News & Updates PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship Official Release PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015. New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL. New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds. New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL. 3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards. Older News See Older News.

Did you know... Load traj load_traj loads a trajectory as "states" into an already loaded molecular object. Since version 1.0, PyMOL uses the Molfile Plugin backend, which supports a variety of trajectory file formats. Older versions only supported the ascii AMBER format (".trj" file extension). Loading a large trajectory may take up a lot of RAM, unless the defer_builds_mode is set to 3. Usage <source lang="python"> load_traj filename ..→

A Random PyMOL-generated Cover. See Covers.