News & Updates
| Official Release
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PyMOL, AxPyMOL, and JyMOL v1.7.4 have all been released on December 3, 2014.
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| New Plugin
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PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
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| PyMOL Open-Source Fellowship
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Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship
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| Official Release
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PyMOL, AxPyMOL, and JyMOL v1.7.2 have all been released on August 4, 2014.
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| Official Release
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PyMOL, AxPyMOL, and JyMOL v1.7 have all been released today, January 14, 2014.
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| New Plugin
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Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
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| New Plugin
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MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
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| 3D using Geforce
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PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
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| New Plugin
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GROMACS_Plugin is a new plugin that ties together PyMOL and GROMACS.
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| New Software
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CMPyMOL is a software that interactively visualizes 2D contact maps of proteins in PyMOL.
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| New Script
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cgo_arrow draws an arrow between two picked atoms.
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| Tips & Tricks
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Instructions for generating movie PDFs using .mpg movies from PyMOL.
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| Older News
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See Older News.
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Did you know...
Here it is! Long awaited, less tested;
Install
- Linux
- In your ~/.pymolrc set something like the following
run ~/pymolscripts/rasmolify.py Finally, make a directory called ~/pymolscripts and copy the code below into a file called rasmolify.py - That should do the trick. You may also like to add a line that reads set virtual_trackball, off in your ~/.pymolrc
- Windows
- ???
Usage
Think 'rasmol'
Related
TODO
- Check if a 'selection' exists, and limit commands to that selection (map the concept of a rasmol 'selection' onto the concept of a pymol selection).
- Implement 'scaling' units for display functions
- Fix the mouse behaviour?
- Add a rasmol GUI!
Code
<source lang="python">
- This is just a quick hack. For something more meaty see;
- http://arcib.dowling.edu/sbevsl/
- Version 0.0.00-000/1
- Turn off the virtual_trackball
cmd.set("virtual_trackball", "off")
- spacefill
def spacefill(p1=):
if(p1=='off'):
..→
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 A Random PyMOL-generated Cover. See Covers.
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