User contributions for Inchoate
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1 April 2009
- 17:4117:41, 1 April 2009 diff hist +58 m Pucker Just made small edits to make the text more clear; also added some "source" stmts
- 17:3817:38, 1 April 2009 diff hist +149 Main Page No edit summary
- 17:3717:37, 1 April 2009 diff hist +36 Pucker No edit summary
31 March 2009
- 19:5319:53, 31 March 2009 diff hist +122 m Talk:Huge surfaces No edit summary current
23 March 2009
- 16:2216:22, 23 March 2009 diff hist +653 Load →NOTES
- 16:2216:22, 23 March 2009 diff hist −321 Load →DESCRIPTION
- 16:0916:09, 23 March 2009 diff hist +320 Load No edit summary
- 14:3914:39, 23 March 2009 diff hist −1 GetNamesInSel No edit summary
- 14:3914:39, 23 March 2009 diff hist −1 GetNamesInSel No edit summary
- 14:3814:38, 23 March 2009 diff hist +435 GetNamesInSel No edit summary
- 14:3614:36, 23 March 2009 diff hist +116 GetNamesInSel No edit summary
21 March 2009
- 11:5411:54, 21 March 2009 diff hist +6 Label No edit summary
20 March 2009
- 09:5509:55, 20 March 2009 diff hist +263 Main Page No edit summary
- 09:5209:52, 20 March 2009 diff hist +634 N CalcArea New page: =Overview= This code will calculate the area of a given selection. If you have a bunch of disparate selections, or one selection made up of various objects then you can use this to find t...
- 09:4809:48, 20 March 2009 diff hist +747 N GetNamesInSel New page: = Overview = This script returns the list of object names that exist in any given selection. For example, if you have 100 objects loaded (viz. ligand poses from small molecule docking) an...
19 March 2009
- 12:3312:33, 19 March 2009 diff hist +96 Align →NOTE
18 March 2009
- 18:0018:00, 18 March 2009 diff hist +219 Linux Install No edit summary
17 March 2009
- 12:0012:00, 17 March 2009 diff hist +68 Surface →Calculating a partial surface
- 11:5911:59, 17 March 2009 diff hist +85 Get area No edit summary
- 11:5711:57, 17 March 2009 diff hist +34 ConnectedCloud No edit summary
15 March 2009
- 09:5809:58, 15 March 2009 diff hist +41 Advanced Scripting No edit summary
11 March 2009
- 09:2909:29, 11 March 2009 diff hist +125 Commands No edit summary
- 09:2809:28, 11 March 2009 diff hist +20 Pymolrc No edit summary
2 March 2009
- 16:2316:23, 2 March 2009 diff hist +124 FindObjectsNearby No edit summary
28 February 2009
- 22:2122:21, 28 February 2009 diff hist +324 As No edit summary
- 22:1722:17, 28 February 2009 diff hist +43 Nonstandard Amino Acids No edit summary current
- 22:1522:15, 28 February 2009 diff hist +50 N Category:Biochemical Properties New page: Information about Biochemical Properties in PyMOL. current
27 February 2009
- 18:0118:01, 27 February 2009 diff hist −3 Main Page No edit summary
- 17:4217:42, 27 February 2009 diff hist +175 Category:Script Library No edit summary
- 17:4117:41, 27 February 2009 diff hist +44 ConnectedCloud No edit summary
- 17:4117:41, 27 February 2009 diff hist +115 Main Page No edit summary
- 17:4017:40, 27 February 2009 diff hist +3,845 N ConnectedCloud New page: = Overview = ConnectedCloud grows a cloud of objects that are "connected." Two objects are "connected" if they are within the user-defined cutoff, radius. It starts with a selection,...
- 17:3017:30, 27 February 2009 diff hist +14 N File:ConnectedCloud2.png objects found. current
- 17:2917:29, 27 February 2009 diff hist +24 N File:ConnectedCloud.png Connected cloud to find. current
26 February 2009
- 16:5516:55, 26 February 2009 diff hist +3 Main Page No edit summary
24 February 2009
- 16:5116:51, 24 February 2009 diff hist +126 Main Page No edit summary
- 15:4415:44, 24 February 2009 diff hist +270 N Category:Launching New page: = Overview = PyMOL can be launched in various ways. You can start it normally, from an icon or the commandline. You can also run it in headless mode from scripts and from within a separa... current
- 15:4215:42, 24 February 2009 diff hist +24 Command Line Options No edit summary
- 09:4409:44, 24 February 2009 diff hist +175 Main Page No edit summary
- 09:4209:42, 24 February 2009 diff hist +3,302 N MakeVinaCommand New page: = Overview = [http://vina.scripps.edu/ Vina] is a new, very fast, molecular docking program, written by Oleg Trott. In order to run Vina, you should have [http://mgltools.scripps.edu/down...
- 09:1609:16, 24 February 2009 diff hist −48 3DNA →Invoking
20 February 2009
- 13:1613:16, 20 February 2009 diff hist +139 Main Page No edit summary
- 13:1413:14, 20 February 2009 diff hist +33 DrawBoundingBox No edit summary
- 13:1313:13, 20 February 2009 diff hist +5,532 N DrawBoundingBox New page: = OVERVIEW = Draws the minumum bounding box around your selection. <gallery> Image:DrawMinBB.png|Example min BB </gallery> = Example = <source lang="python"> run ~/drawMinBoundingBox.py ...
- 13:1113:11, 20 February 2009 diff hist +17 N File:DrawMinBoundBox.tar.bz2 Draw min BB code. current
- 13:0913:09, 20 February 2009 diff hist +20 N File:DrawMinBB.png Example of the minBB current
6 February 2009
- 12:0712:07, 6 February 2009 diff hist +11 Surface solvent No edit summary
29 January 2009
- 13:4213:42, 29 January 2009 diff hist +140 Main Page No edit summary
- 13:4013:40, 29 January 2009 diff hist +2,084 N FindObjectsNearby New page: == Overview == This script returns the names of all objects (in state 1) that are within a certain cutoff distance from your provided target. For example, if you load an MD trajectory and...
28 January 2009
- 16:3416:34, 28 January 2009 diff hist +13 As No edit summary