News & Updates
| Official Release
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PyMOL, AxPyMOL, and JyMOL v1.7.4 have all been released on December 3, 2014.
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| New Plugin
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PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
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| PyMOL Open-Source Fellowship
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Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship
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| Official Release
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PyMOL, AxPyMOL, and JyMOL v1.7.2 have all been released on August 4, 2014.
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| Official Release
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PyMOL, AxPyMOL, and JyMOL v1.7 have all been released today, January 14, 2014.
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| New Plugin
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Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
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| New Plugin
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MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
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| 3D using Geforce
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PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
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| New Plugin
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GROMACS_Plugin is a new plugin that ties together PyMOL and GROMACS.
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| New Software
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CMPyMOL is a software that interactively visualizes 2D contact maps of proteins in PyMOL.
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| New Script
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cgo_arrow draws an arrow between two picked atoms.
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| Tips & Tricks
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Instructions for generating movie PDFs using .mpg movies from PyMOL.
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| Older News
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See Older News.
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Did you know...
The matrix_reset command resets the transformation for an object.
Usage
matrix_reset name [, state [, mode ]]
Arguments
- name = str: object name
- state = int: object state {default: 1}
- mode = int: {defualt: -1 = matrix_mode or 0}
- 0: transformation was applied to coordinates
- 1: reset TTT matrix (movie transformation)
- 2: reset state matrix
Example
fetch 1akeA 4akeA, async=0
# transform 4akeA by superposing it to 1akeA
align 4akeA, 1akeA
# undo the transformation
matrix_reset 4akeA
See Also
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 A Random PyMOL-generated Cover. See Covers.
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