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Revision as of 22:39, 6 November 2016

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Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
To request a new account, email SBGrid at: accounts (@) sbgrid dot org
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) Getting Help
News & Updates
Official Release PyMOL v1.8.4 has been released on October 4, 2016.
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
Official Release PyMOL v1.8.0 has been released on Nov 18, 2015.
PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship
Official Release PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015.
New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
Older News See Older News.
Did you know...

Config Mouse

Config_mouse allows one to change the context the mouse; say for example if it has two button instead of three (so the user doesn't have to set the 2-Button Viewing Mode).

USAGE

If you have a 2-Button mouse and don't want to have to set it every time, add the following line to your pymolrc file.

config_mouse two_button

# put the mouse in the cool-new movie-enabling mode
config_mouse three_button_motions


Three-Button Motions Mode

The Three_Button_Motions mouse configuration mode has been added to PyMOL. To use it, first prepare the mouse mode:

# put the mouse in the cool-new movie-enabling mode
config_mouse three_button_motions

and then click on the mouse-panel (lower right hand side of PyMOL window) until you see a boxed "M" appear in the openGL menu window above. (It should appear after the "C" for Color).

See Also

Three_Button_Motions

A Random PyMOL-generated Cover. See Covers.