Jump to content

Main Page: Difference between revisions

From PyMOL Wiki
No edit summary
No edit summary
Line 5: Line 5:
| The community-run support site for the [http://pymol.org PyMOL] molecular viewer.
| The community-run support site for the [http://pymol.org PyMOL] molecular viewer.
|- style="text-align:center; font-weight:bold; color: #6d6003; font-size: 140%; font-style: italic; font-family: serif;"
|- style="text-align:center; font-weight:bold; color: #6d6003; font-size: 140%; font-style: italic; font-family: serif;"
| To request a new account email: accounts (@) sbgrid dot org
| To request a new account, email: accounts (@) sbgrid dot org
|- style="text-align:center; font-weight:bold; color: #6d6003; font-size: 140%; font-style: italic; font-family: serif;"
|- style="text-align:center; font-weight:bold; color: #6d6003; font-size: 140%; font-style: italic; font-family: serif;"
|}
|}

Revision as of 21:24, 12 September 2016

Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
To request a new account, email: accounts (@) sbgrid dot org
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) Getting Help
News & Updates
Official Release PyMOL v1.8.2 has been released on April 20, 2016.
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
Official Release PyMOL v1.8.0 has been released on Nov 18, 2015.
PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship
Official Release PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015.
New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
Older News See Older News.
Did you know...
delete_states removes states from a multi-state object like a trajectory.

USAGE

delete_states name, 1 2 3  # delete states 1, 2, and 3
delete_states name, 1-3 9-13  # delete states 1 through 3 and 9 through 13

name = name of object or name expression (wildcard supported)

PYMOL API

delete_states(name: str, states: str) -> None
cmd.delete_states(string name = object-name, string states = states string)

EXAMPLES

   delete_state 1nmr, 1-5     # delete states 1 to 5 from 1nmr
   delete_state *, 1-3 10-40  # deletes states 1 to 3 and 10 to 40 from all applicable objects

Note that special care needs to be taken to ensure that the object or selection name does not contain any quotes when passed as an argument.

Note This function currently only applies to non-discrete multistate molecular objects.

SEE ALSO

Remove Delete

A Random PyMOL-generated Cover. See Covers.