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News & Updates Official Release [AxPyMOL, and JyMO v1.7 have all been released] today, January 14, 2014. New Plugin Bondpack is a a collection of PyMOL plugins for easy visualization of atomic bonds. New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL. 3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards. New Plugin GROMACS_Plugin is a new plugin that ties together PyMOL and GROMACS. New Software CMPyMOL is a software that interactively visualizes 2D contact maps of proteins in PyMOL. New Script cgo_arrow draws an arrow between two picked atoms. Tips & Tricks Instructions for generating movie PDFs using .mpg movies from PyMOL. Older News See Older News.

Did you know... Intra rms cur intra_rms_cur calculates rms values for all states of an object over an atom selection relative to the indicated state without performing any fitting. The rms values are returned as a python array. PYMOL API cmd.intra_rms_cur( string selection, int state) PYTHON EXAMPLE from pymol import cmd rms = cmd.intra_rms_cur("(name ca)",1) USER EXAMPLES/COMMENTS See Rms for selection caveats for this group of commands. SEE ALSO Fit, Rms, Rms_Cur, Intra_Fit, Intra_Rms, Pair_Fit

A Random PyMOL-generated Cover. See Covers.