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News & Updates PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship Official Release PyMOL, AxPyMOL, and JyMOL v1.7.2 have all been released on August 4, 2014. Official Release PyMOL, AxPyMOL, and JyMOL v1.7 have all been released today, January 14, 2014. New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds. New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL. 3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards. New Plugin GROMACS_Plugin is a new plugin that ties together PyMOL and GROMACS. New Software CMPyMOL is a software that interactively visualizes 2D contact maps of proteins in PyMOL. New Script cgo_arrow draws an arrow between two picked atoms. Tips & Tricks Instructions for generating movie PDFs using .mpg movies from PyMOL. Older News See Older News.

Did you know... Commands Commands are functions in pymol that are used for viewing, manipulating, and storing molecules. You can get a list of some common commands by typing "help commands" into the pymol command line. Typing this in to version 1.1r1 returns the following: INPUT/OUTPUT load save delete quit VIEW turn move clip rock show hide enable disable reset refresh rebuild zoom origin orient view get_view set_view MOVIES mplay mstop mset mdo mpng mmatrix frame rewind middle ending forward backward IMAGING png mpng RAY TRACING ray MAPS isomesh isodot DISPLAY cls viewport splash SELECTIONS select mask SETTINGS set button ATOMS alter alter_state EDITING create ..→

A Random PyMOL-generated Cover. See Covers.