View source for Homology Modeling

==Align proteins with CA fit==

If the proteins have significant homology, then you can use the align command:
<source lang="python">
align prot1////ca,prot2
</source>
which will perform a sequence alignment of prot1 against prot2, and then an optimizing fit using the CA positions.


[[Category:Modeling_and_Editing_Structures|Homology Modeling]]