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Below is a list of the most recent file uploads. See the gallery of new files for a more visual overview.
(newest | oldest) View (newer 500 | older 500) (20 | 50 | 100 | 250 | 500)- 21:59, 14 March 2023 TeddyWarner talk contribs uploaded File:SurfaceCharge.PNG
- 12:48, 10 March 2023 TeddyWarner talk contribs uploaded File:ChargedOutput.PNG (Output of findSurfaceResiduesListCharged.)
- 05:20, 27 January 2023 GiacomoJanson talk contribs uploaded File:Dockingpie.png (DockingPie interface)
- 14:00, 23 December 2022 Steinkeg talk contribs uploaded File:Cavitomix-plugin-V1.0 screenshot.png (CavitOmiX plugin screenshot (c) Innophore)
- 08:26, 23 December 2022 Steinkeg talk contribs uploaded File:CavitOmiX-action1.png (CavitOmiX Plugin Innophore (c))
- 17:58, 14 December 2022 Steinkeg talk contribs uploaded File:Cavitomix-example1.png (CavitOmiX image of protein for holiday gift (c) Innophore)
- 17:53, 14 December 2022 Steinkeg talk contribs uploaded File:Cavitomix.png (CavitOmiX logo 1024x166 (c) Innophore)
- 22:26, 13 February 2022 Jaredsampson talk contribs uploaded File:Cgo examples.jpg (Assorted rendered CGO objects in PyMOL.)
- 03:17, 27 January 2022 IgorsDubanevics talk contribs uploaded a new version of File:Rsif.2020.18.issue-174.jpg (Reduce dimensions to 900x900.)
- 03:11, 27 January 2022 IgorsDubanevics talk contribs uploaded File:Rsif.2020.18.issue-174.jpg (An elastic network model of the SARS-CoV-2 main protease with N3 inhibitor. Credit: Igors Dubanevics. See the paper ‘Computational Analysis of Dynamic Allostery and Control in the SARS-CoV-2 Main Protease’ J R Soc Interface (http://dx.doi.org/10.10...)
- 14:28, 29 April 2021 ThomasStewart talk contribs uploaded File:Remove-Residue-Button.png (Location of the "Remove" button on the builder panel.)
- 14:15, 29 April 2021 ThomasStewart talk contribs uploaded File:Shortcut-Menu-Edit.png (View of the Keyboard Shortcuts Menu depicting editing a command.)
- 14:14, 29 April 2021 ThomasStewart talk contribs uploaded File:Shortcut-Menu-Delete-Reset.png (View of the Keyboard Shortcuts Menu depicting selections and Delete/Reset buttons.)
- 14:12, 29 April 2021 ThomasStewart talk contribs uploaded File:Shortcut-Menu-Create-New.png (Create New dialog within the Keyboard Shortcut Menu.)
- 14:10, 29 April 2021 ThomasStewart talk contribs uploaded File:Keyboard-Shortcut-Menu-Location.png (Location of the Keyboard Shortcut Menu within the settings menu.)
- 23:31, 28 February 2021 Cchem talk contribs uploaded File:Annotate v pic2.png
- 23:30, 28 February 2021 Cchem talk contribs uploaded File:Annotate v pic3.png
- 23:23, 28 February 2021 Cchem talk contribs uploaded File:Annotate v pic1.png
- 23:20, 28 February 2021 Cchem talk contribs uploaded a new version of File:Modevector.png
- 05:11, 10 February 2021 AkshayUttarkar talk contribs uploaded a new version of File:PICv home screen.PNG
- 05:07, 10 February 2021 AkshayUttarkar talk contribs uploaded File:PICv home screen.PNG
- 03:48, 10 February 2021 AkshayUttarkar talk contribs uploaded a new version of File:PICv.png
- 03:46, 10 February 2021 AkshayUttarkar talk contribs uploaded a new version of File:PICv.png
- 01:39, 10 February 2021 AkshayUttarkar talk contribs uploaded File:PICv.png (PICv Pymol Plugin Protein interaction clustering and visualization (PICv) is a pioneering attempt at clustering and understanding protein-protein interaction for any given protein by implementing ML based clustering. The PyMOL plugin facilitates impor...)
- 05:25, 29 January 2021 Speleo3 talk contribs uploaded File:Properties-Inspector.png (Screenshot of the properties inspector panel after applying the "pretty" preset to PDB 1rx1.)
- 05:26, 16 November 2020 GiacomoJanson talk contribs uploaded File:Pymod3.png
- 09:37, 1 October 2020 Speleo3 talk contribs uploaded File:6sps-mesh-ligand-carved.png
- 09:36, 1 October 2020 Speleo3 talk contribs uploaded File:6sps-mesh-ligand.png
- 09:36, 1 October 2020 Speleo3 talk contribs uploaded File:6sps-mesh-all.png
- 09:35, 1 October 2020 Speleo3 talk contribs uploaded File:Isomesh-buffer-carve.png (isomesh/isosurface buffer and carve arguments explained)
- 09:53, 22 September 2020 Speleo3 talk contribs uploaded File:Cartoon cylindrical helices-2.png (1bb1 with cartoon_cylindrical_helices mode 2 in PyMOL 2.5)
- 09:53, 22 September 2020 Speleo3 talk contribs uploaded File:Cartoon cylindrical helices-1.png (1bb1 with cartoon_cylindrical_helices in PyMOL 2.5)
- 02:29, 23 June 2020 Speleo3 talk contribs uploaded File:Flags-ignore-exfoliate.png (Ala-Cys with "ignore" (left) and "exfoliate" (right) flags on the CYS atoms)
- 00:24, 8 February 2020 XinYu talk contribs uploaded File:Annotate v pic3.jpg (example output)
- 00:11, 8 February 2020 XinYu talk contribs uploaded File:Annotate v pic2.jpg (Print out of the FR and CDR regions)
- 23:48, 7 February 2020 XinYu talk contribs uploaded File:Annotate v pic1.jpg (Create VH and VL groups. Alternatively, click-select the VH and VL sequence so that they're in the `sele` group)
- 10:28, 25 January 2020 LucianoKagami talk contribs uploaded File:Ramachandran.png (Ramachandran)
- 10:27, 25 January 2020 LucianoKagami talk contribs uploaded File:PDF.png (Probability Density Function)
- 10:26, 25 January 2020 LucianoKagami talk contribs uploaded File:Pincer Angle.png (Pincer Angle)
- 10:25, 25 January 2020 LucianoKagami talk contribs uploaded File:Modevector.png (Modevectors)
- 10:20, 25 January 2020 LucianoKagami talk contribs uploaded File:Figure 4.png (Free Energy Landscape)
- 13:03, 24 December 2019 LucianoKagami talk contribs uploaded File:Geo measures.png
- 01:52, 18 November 2019 PedroLacerda talk contribs uploaded a new version of File:Views.png
- 01:28, 18 November 2019 PedroLacerda talk contribs uploaded File:Views.png (Screenshot of the "views" plugin.)
- 21:18, 23 August 2019 Suyang talk contribs uploaded File:Overlapping peptides.png
- 17:26, 29 January 2019 JarrettJohnson talk contribs uploaded File:DNA Builder5.png
- 17:26, 29 January 2019 JarrettJohnson talk contribs uploaded File:DNA Builder4.png
- 17:26, 29 January 2019 JarrettJohnson talk contribs uploaded File:DNA Builder3.png
- 17:26, 29 January 2019 JarrettJohnson talk contribs uploaded File:DNA Builder2.png
- 17:25, 29 January 2019 JarrettJohnson talk contribs uploaded File:DNA Builder1.png
- 12:28, 20 December 2018 Speleo3 talk contribs uploaded File:Ray trace disco factor-1-spheres.png (fragment indane as spheres set ray_trace_mode, 3 set ray_trace_disco_factor, 1.0)
- 12:28, 20 December 2018 Speleo3 talk contribs uploaded File:Ray trace disco factor-0-spheres.png (fragment indane as spheres set ray_trace_mode, 3 set ray_trace_disco_factor, 0.0)
- 12:27, 20 December 2018 Speleo3 talk contribs uploaded File:Ray trace disco factor-1-sticks.png (fragment indane as sticks set ray_trace_mode, 3 set ray_trace_disco_factor, 1.0)
- 12:27, 20 December 2018 Speleo3 talk contribs uploaded File:Ray trace disco factor-0-sticks.png (fragment indane as sticks set ray_trace_mode, 3 set ray_trace_disco_factor, 0.0)
- 12:25, 20 December 2018 Speleo3 talk contribs uploaded File:Ray trace disco factor-1-cartoon.png (fetch 1ubq, async=0 as cartoon set ray_trace_mode, 3 set ray_trace_disco_factor, 1.0)
- 12:19, 20 December 2018 Speleo3 talk contribs uploaded File:Ray trace disco factor-0-cartoon.png (fetch 1ubq, async=0 as cartoon set ray_trace_mode, 3 set ray_trace_disco_factor, 0.0)
- 16:42, 18 December 2018 JarrettJohnson talk contribs uploaded File:Fnab example.png (Example result of the fnab command.)
- 15:53, 14 December 2018 JarrettJohnson talk contribs uploaded File:1rmm-atom-cartoon-transparency.png (Beta barrel showing atom-level cartoon transparency.)
- 00:04, 6 December 2018 Jaredsampson talk contribs uploaded File:4gms colors.png (Prepared in response to a pymol-users thread from 11/30/2018-12/5/2018 about the appearance of transparency in a published figure. Script to reproduce: bg_color white fetch 4gms, async=0 # hemagglutinin selections select ha, chain A select l130, ha...)
- 14:12, 13 November 2018 Speleo3 talk contribs uploaded File:Designer-demo-plugin.png (Screenshot of Qt Designer with the demo plugin UI)
- 08:23, 13 November 2018 Speleo3 talk contribs uploaded a new version of File:Plugin manager installed.png (fix typo)
- 08:20, 13 November 2018 Speleo3 talk contribs uploaded File:Plugin manager settings.png
- 08:20, 13 November 2018 Speleo3 talk contribs uploaded File:Plugin manager install new.png
- 08:19, 13 November 2018 Speleo3 talk contribs uploaded File:Plugin manager installed.png
- 07:51, 22 October 2018 Speleo3 talk contribs uploaded File:Load brick example.png (volume display of an artificial map)
- 06:53, 24 July 2018 Speleo3 talk contribs uploaded File:Ramp-levels-menu.png (changing ramp level after APBS calculation)
- 06:46, 24 July 2018 Speleo3 talk contribs uploaded File:APBS-Electrostatics-Plugin-Options.png (Screenshot of the "APBS Electrostatics" plugin with all options extended.)
- 14:07, 12 June 2018 MatthewConroy talk contribs uploaded File:PDBe 3b43 domains 2.png (CATH domains shown in PDB entry 3b43)
- 04:58, 8 May 2018 MarkoJukic talk contribs uploaded File:Feature 4duh.PNG
- 04:57, 8 May 2018 MarkoJukic talk contribs uploaded File:Cluster analysis tab.PNG (cluster analysis tab of ProBiS H2O plugin.)
- 04:54, 8 May 2018 MarkoJukic talk contribs uploaded File:Define system tab.PNG (define system tab of ProBiS H2O plugin)
- 04:42, 13 December 2017 Speleo3 talk contribs uploaded File:Cartoon all alt.png (fetch 5a0d, async=0 spectrum alt as cartoon set cartoon_all_alt)
- 06:11, 29 November 2017 Speleo3 talk contribs uploaded File:Right-click-macro.png (Atom right click context menu with selection macro title)
- 17:01, 21 November 2017 Speleo3 talk contribs uploaded File:Solvent-or-chain-A.png (fetch 1a00, async=0 color green, polymer orient as ribbon bg white set ray_shadow, 0 show spheres, solvent or chain A)
- 17:01, 21 November 2017 Speleo3 talk contribs uploaded File:Solvent-and-chain-A.png (fetch 1a00, async=0 color green, polymer orient as ribbon bg white set ray_shadow, 0 show spheres, solvent and chain A)
- 00:17, 26 October 2017 Jaredsampson talk contribs uploaded File:Colorblindfriendly menu.png (Screenshot of the color list menu added to the OpenGL GUI by the colorblindfriendly.py script in PyMOL 2.0.)
- 05:50, 19 October 2017 Speleo3 talk contribs uploaded File:Intra xfit-1nmr.png (fetch 1nmr, async=0 intra_xfit 1nmr, load_b=1 spectrum b, blue_white_red, guide set all_states)
- 21:31, 27 August 2017 Cchem talk contribs uploaded File:PluginManagerCaverPlugin301 fixed.png
- 08:48, 22 August 2017 Speleo3 talk contribs uploaded File:PluginManagerCaverPlugin301.jpg (Plugin Manager Screenshot with modified Caver Plugin)
- 07:21, 13 July 2017 LukasPravda talk contribs uploaded a new version of File:Plugin.png
- 14:03, 9 March 2017 Piotr talk contribs uploaded File:Surface smooth on example.png (Surface smoothing example (surface_edge_smooth=on))
- 14:02, 9 March 2017 Piotr talk contribs uploaded File:Surface smooth off example.png (Surface smoothing example (surface_edge_smooth=off))
- 17:19, 24 February 2017 Speleo3 talk contribs uploaded a new version of File:Surface carve selection.gif
- 17:16, 24 February 2017 Speleo3 talk contribs uploaded File:Surface carve selection.gif
- 16:21, 24 February 2017 Piotr talk contribs uploaded File:Surface smooth edges on.png (Example of trimmed surface with surface_smooth_edges == on)
- 16:21, 24 February 2017 Piotr talk contribs uploaded File:Surface smooth edges off.png (Example of trimmed surface with surface_smooth_edges == off)
- 16:07, 24 February 2017 Speleo3 talk contribs uploaded File:Surface proximity.png (fetch 5hpr, async=0 color red color yellow, chain B as cartoon show surface, chain B copy off, 5hpr set surface_proximity, off, off label A/21/CA, "surface_proximity=on" label /off//A/21/CA, "surface_proximity=off" set grid_mode set_view (\ -0.6789...)
- 17:46, 10 February 2017 Ericolmon talk contribs uploaded File:Irvinggeis pymol 500px.png (Hemoglobin, representation inspired by Irving Geis, 20th century Science Illustrator)
- 05:30, 17 January 2017 LukasPravda talk contribs uploaded File:Nucl. Acids Res.-2015-Front-Matter DBissue.jpg
- 13:39, 14 January 2017 Jaredsampson talk contribs uploaded File:PyMOLProbity GUI.png (Screenshot of the "Review Flips" tab of the PyMOLProbity plugin GUI, where flippable side chains in the selected object can be inspected, animated between unflipped (i.e. Reduce-output) and flipped orientations, and selected for future operations.)
- 16:00, 26 December 2016 Tlinnet talk contribs uploaded File:Plane img3.png
- 16:00, 26 December 2016 Tlinnet talk contribs uploaded File:Plane img2.png
- 16:00, 26 December 2016 Tlinnet talk contribs uploaded File:Plane img1.png (Illustraion of plane drawing)
- 22:32, 6 November 2016 MichelleOttaviano talk contribs uploaded File:SBGridlogo2.jpg
- 22:23, 6 November 2016 MichelleOttaviano talk contribs uploaded File:SBGrid badge.gif
- 22:11, 6 November 2016 MichelleOttaviano talk contribs uploaded File:SBGridlogo.jpg
- 12:43, 5 October 2016 Speleo3 talk contribs uploaded File:C-menu-isomesh-negative.png ("C > negative > ..." menu of an isomesh in PyMOL 1.8.4)
- 12:43, 5 October 2016 Speleo3 talk contribs uploaded File:A-menu-isomesh-negative.png ("A > mesh" menu of a map in PyMOL 1.8.4)
- 12:07, 5 October 2016 Speleo3 talk contribs uploaded File:Stick h scale.png (fragment trp as sticks set stick_h_scale, 0.4)
- 06:13, 23 June 2016 JohnBerrisford talk contribs uploaded a new version of File:PDB 5j96 assemblies.png (Assemblies in the PDB entry 5j96)
- 06:12, 23 June 2016 JohnBerrisford talk contribs uploaded File:PDB 5j96 assemblies.png (Assemblies show in the PDB entry 5j96)
- 06:08, 23 June 2016 JohnBerrisford talk contribs uploaded File:PDB plugin.png (Additional menu items provided with the PDB plugin)
- 17:46, 22 June 2016 JohnBerrisford talk contribs uploaded File:Pdbe logo.png
- 17:45, 22 June 2016 JohnBerrisford talk contribs uploaded File:Wwpdb-logo.png
- 16:25, 22 June 2016 JohnBerrisford talk contribs uploaded File:Pdbe 3unb assemblies.png (The assemblies shown for PDB entry 3unb)
- 16:14, 22 June 2016 JohnBerrisford talk contribs uploaded File:Pdbe 3unb all annotation.png (All annotation shown on PDB entry 3unb)
- 16:04, 22 June 2016 JohnBerrisford talk contribs uploaded File:Pdbe 3l2p entity.png (Distinct molecules show in PDB entry 3l2p)
- 16:01, 22 June 2016 JohnBerrisford talk contribs uploaded File:Pdbe 3b43 domains.png (CATH domains shown on PDB entry 3b43)
- 16:00, 22 June 2016 JohnBerrisford talk contribs uploaded File:Pdbe 2gc2 validation.png (Geometry validation shown on PDB entry 2gc2)
- 15:59, 22 June 2016 JohnBerrisford talk contribs uploaded File:Pdbe plugin menu.png (screenshot of the PDBe plugin menu)
- 14:29, 25 May 2016 Clgeng talk contribs uploaded a new version of File:Drawgridbox padding.png
- 14:14, 25 May 2016 Clgeng talk contribs uploaded a new version of File:Gridbox.png
- 08:37, 19 May 2016 Clgeng talk contribs uploaded File:Gridbox padding.png
- 08:36, 19 May 2016 Clgeng talk contribs uploaded File:Gridbox.png
- 10:40, 12 May 2016 Steinkeg talk contribs uploaded File:Bni track.jpg (Created using bni-tools track main-chain preset.)
- 10:39, 12 May 2016 Steinkeg talk contribs uploaded File:Bni plane.jpg (Created using bni-tools plane command)
- 10:38, 12 May 2016 Steinkeg talk contribs uploaded File:Bni excludesurf.jpg (Image created by using bni-tools exclude surface command)
- 10:36, 12 May 2016 Steinkeg talk contribs uploaded File:Bni box2.jpg (Image created using bni-tools.)
- 10:31, 12 May 2016 Steinkeg talk contribs uploaded File:Bni delphimap.jpg (Image created using bni-tools and delphi map load command.)
- 10:28, 12 May 2016 Steinkeg talk contribs uploaded File:Bni box.jpg (Image created using bni-tools box command.)
- 15:13, 5 May 2016 Speleo3 talk contribs uploaded a new version of File:Hdgyp cover.jpg (downsampled)
- 09:48, 28 April 2016 Speleo3 talk contribs uploaded File:Bnitools.png (Screenshot of the BNI Tools plugin menu)
- 13:37, 12 April 2016 Speleo3 talk contribs uploaded File:Cartoon gap cutoff.png
- 13:24, 12 April 2016 Inchoate talk contribs uploaded File:Test.jpg
- 10:17, 18 November 2015 JanezKonc talk contribs uploaded File:2DResultOutputtabPyMOLViewerLinux3.png
- 10:16, 18 November 2015 JanezKonc talk contribs uploaded File:2DResultOutputtabPyMOLViewerLinux2.png
- 10:15, 18 November 2015 JanezKonc talk contribs uploaded File:2DResultOutputtabPyMOLViewerLinux1.png
- 08:20, 18 November 2015 JanezKonc talk contribs uploaded a new version of File:3DResultsOutputtabPyMOLViewer1.png (Sample results of 3D results displayed on the plugin. Screen shot of Output tab and the PyMOL viewer screen. )
- 08:18, 18 November 2015 JanezKonc talk contribs uploaded File:3DResultsOutputtabPyMOLViewer1.png
- 08:17, 18 November 2015 JanezKonc talk contribs uploaded File:InputTab3DLiSiCALinuxv1.0.0.png (Screen shot of the LiSiCA input tab with product graph dimension chosen as 3D. )
- 06:48, 18 November 2015 JanezKonc talk contribs uploaded File:LiSiCA2DResultsConsiderHydrogen.png
- 06:46, 18 November 2015 JanezKonc talk contribs uploaded a new version of File:ConsiderHydrogenInputtab2DLiSiCAv1.0.0.png
- 06:43, 18 November 2015 JanezKonc talk contribs uploaded File:ConsiderHydrogenInputtab2DLiSiCAv1.0.0.png (2D LiSiCA Input with consider hydrogen atoms checkbox selected. Hydrogen atoms to be considered when finding the maximum clique graphs.)
- 06:21, 18 November 2015 JanezKonc talk contribs uploaded a new version of File:InputTab2DLiSiCAWindows7v1.0.0.png
- 06:11, 18 November 2015 JanezKonc talk contribs uploaded File:OutputTab2DLiSiCAWindows7v1.0.0.png (Screen-shot of output tab on Windows 7 machine.)
- 06:10, 18 November 2015 JanezKonc talk contribs uploaded File:InputTab2DLiSiCAWindows7v1.0.0.png (Screen-shot of Input Tab for 2D LiSiCA on Windows 7 machine. )
- 05:51, 18 November 2015 JanezKonc talk contribs uploaded File:PyMOLViewer2DLiSiCA.png (Screenshot of PyMOL Viewer screen displaying two molecules (the reference and one of the target molecules from the target database) side by side. 2D LiSiCA. The corresponding atoms of the substructure common to both the molecules is visualized/highlighte)
- 05:45, 18 November 2015 JanezKonc talk contribs uploaded File:OutputTab2DLiSiCALinuxv1.0.0.png (Screenshot of Output tab with results from a 2D LiSiCA. On Linux. LiSiCA version v1.0.0.)
- 05:43, 18 November 2015 JanezKonc talk contribs uploaded File:InputTab2DLiSiCALinuxv1.0.0.png (Screenshot of Input tab with parameter selection for 2D LiSiCA v1.0.0.)
- 14:55, 31 October 2015 Bell talk contribs uploaded a new version of File:Libgfortran.3.dylib.zip
- 14:06, 31 October 2015 Bell talk contribs uploaded File:Helicity check-1.0.tar.zip
- 13:31, 31 October 2015 Bell talk contribs uploaded a new version of File:Resicolor-0.1.tar.zip
- 13:31, 31 October 2015 Bell talk contribs uploaded File:Resicolor-0.1.tar.zip
- 13:14, 31 October 2015 Bell talk contribs uploaded File:Libgfortran.3.dylib.zip
- 09:16, 14 October 2015 PabloGuardado talk contribs uploaded File:2vak ASU.png
- 09:10, 14 October 2015 PabloGuardado talk contribs uploaded File:2vak A.png
- 09:10, 14 October 2015 PabloGuardado talk contribs uploaded File:2vak AABB.png
- 09:09, 14 October 2015 PabloGuardado talk contribs uploaded File:2vak IABB.png
- 15:39, 10 September 2015 Speleo3 talk contribs uploaded File:1okyVolPanel.png (Volume panel for File:1okyVol.png)
- 15:35, 10 September 2015 Speleo3 talk contribs uploaded File:1okyVol.png (Volume visualization of electron density for PDB 1oky)
- 07:52, 9 September 2015 Mazen talk contribs uploaded File:Jctcce v011i009.jpg (About the Cover: The thermodynamic role of the conformational changes upon biomolecular interactions is shown to be exactly quantified using a distance measure from information theory, Kullback–Leibler (KL) divergence between the distributions of the co)
- 07:29, 9 September 2015 OsvaldoMartin talk contribs uploaded File:Azahar GUI.png
- 22:33, 8 September 2015 Inchoate talk contribs uploaded File:J square.jpg (Testing upload.)
- 14:12, 24 March 2015 Mpb21 talk contribs uploaded File:Frame slider.png (Screen shot of the Frame_slider GUI)
- 05:43, 10 March 2015 TomaszMakarewicz talk contribs uploaded File:Menu1.png (Dynamics PyMOL Plugin Menu 2.0)
- 13:55, 30 January 2015 DomBellini talk contribs uploaded File:Hdgyp cover.jpg (Structure of P. maritima HDGYP domain showing a novel tri-iron catalytic centre)
- 12:18, 15 December 2014 PabloGuardado talk contribs uploaded File:3rfg4.png
- 12:17, 15 December 2014 PabloGuardado talk contribs uploaded File:3rfg3.png
- 12:17, 15 December 2014 PabloGuardado talk contribs uploaded File:3rfg2.png
- 12:17, 15 December 2014 PabloGuardado talk contribs uploaded File:3rfg1.png
- 11:54, 15 December 2014 PabloGuardado talk contribs uploaded File:2vak4.png
- 11:49, 15 December 2014 PabloGuardado talk contribs uploaded File:2vak2.png
- 11:44, 15 December 2014 PabloGuardado talk contribs uploaded File:2vak 1.png
- 05:32, 4 December 2014 Andwar talk contribs uploaded File:Pytms menu.png (pytms menu example)
- 05:24, 4 December 2014 Andwar talk contribs uploaded File:Pytms optimization animation.gif (example of PyTMs animated optimization)
- 05:23, 4 December 2014 Andwar talk contribs uploaded File:Pytms.gif (examples of PTM-AA)
- 20:00, 23 October 2014 RobbieSikora talk contribs uploaded File:Final molecule.png (The product of Ctrl + J + Enter)
- 19:59, 23 October 2014 RobbieSikora talk contribs uploaded File:Segregated molecule.png
- 19:58, 23 October 2014 RobbieSikora talk contribs uploaded File:Boundingboxsel.png (Using the bounding box in Blender to select all the parts of a molecule.)
- 19:57, 23 October 2014 RobbieSikora talk contribs uploaded File:Boundingboxstart.png
- 19:57, 23 October 2014 RobbieSikora talk contribs uploaded File:Theproblem.png (The problem with a raw PyMOL import - there are more pieces to a molecule than meet the eye!)
- 19:56, 23 October 2014 RobbieSikora talk contribs uploaded File:Starting.png (1-2 BPG in Blender, imported from PyMOL)
- 15:25, 19 October 2014 YuanWang talk contribs uploaded File:Pyanm example of msf.png (PyANM: demonstration of calculated Mean Square Fluctuations (MSF))
- 15:24, 19 October 2014 YuanWang talk contribs uploaded File:PyANM interface.png (PyANM: screenshot of PyANM interface)
- 15:23, 19 October 2014 YuanWang talk contribs uploaded File:Pyanm example of arrows.png (PyANM: demonstration of arrows)
- 15:22, 19 October 2014 YuanWang talk contribs uploaded File:Pyanm example of springs.png (PyANM: demonstration of springs)
- 11:16, 22 September 2014 PietroGattiLafranconi talk contribs uploaded File:LoadBfacts02.png
- 11:16, 22 September 2014 PietroGattiLafranconi talk contribs uploaded File:LoadBfacts1.png
- 20:01, 3 September 2014 BenBarad talk contribs uploaded File:Sublime text highlighting.png (Pymol Language v0.2.2 on Sublime Text, using the Spacegray color scheme.)
- 13:43, 24 July 2014 Mpb21 talk contribs uploaded File:Cluster mols py pymol.png (Some clusters loaded into pymol after clustering from cluster_mols)
- 13:41, 24 July 2014 Mpb21 talk contribs uploaded File:Cluster mols screen 2 desc.png (Image of the clustering screen from cluster_mols)
- 13:38, 24 July 2014 Mpb21 talk contribs uploaded File:Cluster mols screen 1 desc.png (Image of the similarity calculation screen from cluster_mols)
- 12:47, 24 July 2014 Jaredsampson talk contribs uploaded File:Outline cleaned.png (Cleaned-up version of Outline_composite.png, with extra outline lines erased.)
- 12:45, 24 July 2014 Jaredsampson talk contribs uploaded File:Outline composite.png (Composite of Outine_base.png and Outline_overlay.png.)
- 12:42, 24 July 2014 Jaredsampson talk contribs uploaded File:Outline overlay.png (Cytochrome C (3cyt) residues within 2Å of Lys85 are outlined in yellow, using `ray_trace_mode` and `ray_trace_color` settings.)
- 12:39, 24 July 2014 Jaredsampson talk contribs uploaded File:Outline base.png (Surface representation of Cytochrome C (3cyt).)
- 07:32, 16 July 2014 Andwar talk contribs uploaded File:Cgo grid.gif (cgo_grid example)
- 07:32, 16 July 2014 Andwar talk contribs uploaded File:Cgo grid.png (concept sketch)
- 06:23, 13 July 2014 Andwar talk contribs uploaded File:Distancetoatom 2.png (using distancetoatoms for labeling distances)
- 06:22, 13 July 2014 Andwar talk contribs uploaded File:Distancetoatom 1.png (using distancetoatoms for coloring by distance)
- 06:22, 13 July 2014 Andwar talk contribs uploaded File:Distancetoatom 0.png (Depiction for distancetoatoms illustrating cutoff)
- 08:18, 10 June 2014 Andwar talk contribs uploaded File:1LSD random colors.png (example for using get_random_color)
- 05:03, 10 June 2014 Andwar talk contribs uploaded File:Quickdisplays combo.png (example quickdisplays - combined)
- 05:02, 10 June 2014 Andwar talk contribs uploaded File:Quickdisplays disp ball stick.png (example: quickdisplays.disp_ball_stick)
- 05:01, 10 June 2014 Andwar talk contribs uploaded File:Quickdisplays disp mesh.png (example: quickdisplays.disp_mesh)
- 05:01, 10 June 2014 Andwar talk contribs uploaded File:Quickdisplays disp putty.png (example: quickdisplays.disp_putty)
- 05:00, 10 June 2014 Andwar talk contribs uploaded File:Quickdisplays disp ss.png (example: quickdisplays.disp_ss)
- 05:00, 10 June 2014 Andwar talk contribs uploaded File:Quickdisplays disp surf.png (example: quickdisplays.disp_surf)
- 04:58, 10 June 2014 Andwar talk contribs uploaded File:Movie color fade example 1.gif (example for movie_color_fade script)
- 10:23, 9 June 2014 Bell talk contribs uploaded a new version of File:Valence size mode0.gif
- 06:51, 6 June 2014 Andwar talk contribs uploaded File:Movie fade example.gif (An example for movie_fade.py)
- 17:21, 4 June 2014 Andwar talk contribs uploaded File:Valence size mode1.gif (Gif animation of valence_size with volence_mode 1)
- 17:19, 4 June 2014 Andwar talk contribs uploaded File:Valence size mode0.gif (Gif animation of valence_size with volence_mode 0)
- 16:10, 29 May 2014 Andwar talk contribs uploaded File:PHE delocalized.png
- 16:10, 29 May 2014 Andwar talk contribs uploaded File:PHE valence 1 mode 0.png
- 16:09, 29 May 2014 Andwar talk contribs uploaded File:PHE valence 1 mode 1.png
- 16:09, 29 May 2014 Andwar talk contribs uploaded File:PHE valence 0.png
- 22:50, 8 March 2014 Speleo3 talk contribs uploaded a new version of File:Surface ramp above mode.jpg (illustration of the surface_ramp_above_mode/surface_solvent setting combinations)
- 22:49, 8 March 2014 Speleo3 talk contribs uploaded File:Surface ramp above mode.jpg (illustration of the surface_ramp_above_mode/surface_solvent setting combinations)
- 11:02, 4 February 2014 Inchoate talk contribs uploaded File:Amyloid.png (Example (simulated) amyloid beta.)
- 10:59, 4 February 2014 Inchoate talk contribs uploaded File:3D-B-DNA.png (Anaglyph image of DNA)
- 11:48, 17 December 2013 Inchoate talk contribs uploaded File:Ana4 focal ray.png (Ray trace with anaglyph and focal blur.)
- 12:20, 18 November 2013 SebastianRaschka talk contribs uploaded File:Bondlab.png
- 12:20, 18 November 2013 SebastianRaschka talk contribs uploaded File:Bondvis.png
- 12:19, 18 November 2013 SebastianRaschka talk contribs uploaded File:Hydrobond action.png
- 12:19, 18 November 2013 SebastianRaschka talk contribs uploaded File:Bondinfo.png
- 12:19, 18 November 2013 SebastianRaschka talk contribs uploaded File:Add hydrogens.png
- 20:15, 6 October 2013 OsvaldoMartin talk contribs uploaded File:Optimize.png (optimize plugin GUI)
- 17:20, 3 October 2013 OsvaldoMartin talk contribs uploaded File:Wrappers histogram.png (Histogram of the number of wrappers per hydrongen bond for a set of high-quality X-ray protein structures. )
- 08:18, 10 September 2013 LukasPravda talk contribs uploaded File:Plugin.png (MOLE 2.0 plugin GUI)
- 08:08, 10 September 2013 LukasPravda talk contribs uploaded File:Molelogo.png (Mole 2.0 logo)
- 07:46, 10 September 2013 LukasPravda talk contribs uploaded File:1jj2.png (Example of channel system of large ribosomal subunit (1JJ2))
- 05:12, 2 September 2013 GianlucaTomasello talk contribs uploaded File:Example 1 FAD 1C0L.png
- 18:25, 28 August 2013 OsvaldoMartin talk contribs uploaded a new version of File:Cheshift.png (The new file reflects the new color code used in CheShift-2)
- 07:57, 29 July 2013 TomaszMakarewicz talk contribs uploaded File:Figure2a.png (Main Window in Dynamics PyMOL Plugin)
- 13:50, 24 July 2013 PietroGattiLafranconi talk contribs uploaded File:Pairwise3.png
- 13:50, 24 July 2013 PietroGattiLafranconi talk contribs uploaded File:Pairwise2.png
- 13:49, 24 July 2013 PietroGattiLafranconi talk contribs uploaded File:Pairwise1.png
- 03:41, 9 July 2013 Gha talk contribs uploaded File:MtsslTrilaterate screenshot.png
- 10:35, 4 July 2013 Gha talk contribs uploaded File:MtsslDock results.jpg
- 10:33, 4 July 2013 Gha talk contribs uploaded File:MtsslDock distanceTable.jpg
- 10:31, 4 July 2013 Gha talk contribs uploaded File:MtsslDock Import Labels.jpg
- 10:15, 4 July 2013 Gha talk contribs uploaded File:MtsslDock screenshot.jpg
- 15:53, 21 May 2013 Venky talk contribs uploaded File:Heatmap-CMPyMOL.PNG
- 16:37, 20 May 2013 Venky talk contribs uploaded File:CMPyMOL.PNG
- 09:12, 17 May 2013 Inchoate talk contribs uploaded File:Cover Paunescu.jpg (Paunescu's Cover)
- 13:17, 1 May 2013 Venky talk contribs uploaded File:Contact density.png
- 13:17, 1 May 2013 Venky talk contribs uploaded File:Heatmap.png
- 14:31, 30 April 2013 Venky talk contribs uploaded File:CMPyMOL-Screenshot.PNG (Screenshot of CMPyMOL software that interfaces with PyMOL to combine 3D visualization of protein and 2D contact map representation.)
- 11:56, 26 April 2013 Jaredsampson talk contribs uploaded File:20091111 Structure cover.jpg (Cover of the 11 November 2009 issue of Structure. Artwork by Jared Sampson, Xiangpeng Kong lab, New York University School of Medicine.)
- 04:53, 23 April 2013 Speleo3 talk contribs uploaded File:Cgo arrow example.png (CGO arrow, made with cgo_arrow script)
- 10:55, 17 April 2013 Inchoate talk contribs uploaded File:StylizedFocalBlur.png
- 12:07, 12 April 2013 Inchoate talk contribs uploaded File:Stylized bns.png (Stylized ball and sticks)
- 21:54, 7 March 2013 Inchoate talk contribs uploaded File:It.png (inertia tensor)
- 12:09, 31 January 2013 Gha talk contribs uploaded File:MtsslWizardv1-1.jpg
- 11:17, 13 January 2013 PietroGattiLafranconi talk contribs uploaded File:DistancesRH ex3.png
- 11:16, 13 January 2013 PietroGattiLafranconi talk contribs uploaded File:DistancesRH ex2.png
- 11:16, 13 January 2013 PietroGattiLafranconi talk contribs uploaded File:DistancesRH ex1.png
- 01:13, 3 January 2013 Inchoate talk contribs uploaded File:ParM.gif
- 04:47, 6 December 2012 Speleo3 talk contribs uploaded File:Connect cutoff.png (connect_cutoff setting example)
- 10:47, 20 September 2012 Hongbo zhu talk contribs uploaded File:Nb spheres.png (This png is generated using PyMOL 1.5.0.1. PDB structure model 1acb.pdb is rendered. )
- 06:53, 15 September 2012 LarsS talk contribs uploaded File:Proteins 08010 c1 sp Ob.png (Proteins Cover October 2012 - MD simulations of GroEL)
- 02:32, 18 August 2012 TakanoriNakane talk contribs uploaded File:Shader bug fixed.png (Corrected version of 'shader_bug.png')
- 02:31, 18 August 2012 TakanoriNakane talk contribs uploaded File:Shader bug.png (Cylinder shader bug which can be fixed by 'set cylinder_shader_ff_workaround, on')
- 09:16, 26 June 2012 Speleo3 talk contribs uploaded File:Poseviewscreenshot.png (screenshot for poseview example: fetch 1a00, async=0 poseview chain C and resn HEM)
- 16:22, 12 June 2012 Shiven talk contribs uploaded File:GLSLToonCartoon.png
- 16:22, 12 June 2012 Shiven talk contribs uploaded File:GLSLToonSperes.png
- 14:45, 8 June 2012 Jaredsampson talk contribs uploaded File:Stanfield.png (Example PDBs from Stanfield, et al., JMB 2006 as shown in Fig. 1 of that paper. elbow_angle.py was used to calculate the elbow angles and draw a representation of the vectors used in the calculation.)
- 14:29, 8 June 2012 Jaredsampson talk contribs uploaded File:Elbow angle 3ghe.png (View of the elbow_angle vector representation for the Fab fragment from PDB 3ghe.)
- 09:04, 21 May 2012 Inchoate talk contribs uploaded File:Sb.png (Showing bumps using this script.)
- 13:16, 10 May 2012 Inchoate talk contribs uploaded File:B2.png
- 11:40, 4 May 2012 Inchoate talk contribs uploaded File:Goodsell like2.png
- 12:44, 6 April 2012 Inchoate talk contribs uploaded File:PNASCover.gif
- 15:00, 28 February 2012 OsvaldoMartin talk contribs uploaded a new version of File:Dehydrons.png (Reverted to version as of 18:54, 28 February 2012)
- 15:00, 28 February 2012 OsvaldoMartin talk contribs uploaded a new version of File:Dehydrons.png (Reverted to version as of 18:59, 28 February 2012)
- 15:00, 28 February 2012 OsvaldoMartin talk contribs uploaded a new version of File:Dehydrons.png
- 14:59, 28 February 2012 OsvaldoMartin talk contribs uploaded a new version of File:Dehydrons.png
- 14:58, 28 February 2012 OsvaldoMartin talk contribs uploaded a new version of File:Dehydrons.png
- 14:54, 28 February 2012 OsvaldoMartin talk contribs uploaded a new version of File:Dehydrons.png (The new figure reflect some of the changes made in version 1.5)
- 18:30, 22 February 2012 Inchoate talk contribs uploaded File:Cool.png
- 02:37, 14 February 2012 OsvaldoMartin talk contribs uploaded File:Cheshift.png (Result of a CheShift analysis)
- 01:47, 14 February 2012 OsvaldoMartin talk contribs uploaded a new version of File:Dehydrons.png
- 18:58, 2 February 2012 Venky talk contribs uploaded File:Gyration tensor.png (Gyration tensor plugin screenshot)
- 10:36, 18 January 2012 OsvaldoMartin talk contribs uploaded File:Dehydrons.png (Dehydrons calculated and displayed in PyMOL using dehydrons.py)
- 17:01, 16 January 2012 Tlinnet talk contribs uploaded File:Pymol2glmol.png (Example of pymol2glmol)
- 18:05, 13 January 2012 Inchoate talk contribs uploaded File:Cyspka.png (Image from using cyspka)
- 13:45, 13 January 2012 Venky talk contribs uploaded File:Screenshot.png
- 13:34, 13 January 2012 Venky talk contribs uploaded File:Contact-Map-of-a-Trajectory.png (A Typical contact map generated from g_mdmat program in the Gromacs analysis package.)
- 12:29, 11 January 2012 Gha talk contribs uploaded File:MtsslWizard gui.jpg (Screen shot of mtsslWizard gui)
- 23:22, 4 January 2012 Inchoate talk contribs uploaded File:Goldenberg cover.jpg
- 06:10, 14 December 2011 Speleo3 talk contribs uploaded File:1C0M tmalign01.png (/1C0M//B to 1BCO alignment)
- 06:09, 14 December 2011 Speleo3 talk contribs uploaded File:1C0M cealign01.png
- 06:09, 14 December 2011 Speleo3 talk contribs uploaded File:1C0M super01.png (/1C0M//B to 1BCO alignment)
- 06:09, 14 December 2011 Speleo3 talk contribs uploaded File:1C0M align01.png (/1C0M//B to 1BCO alignment)
- 12:32, 8 December 2011 Inchoate talk contribs uploaded File:Cbcon.png (example result of coloring by conservation of sequence)
- 03:28, 30 November 2011 James talk contribs uploaded File:Pymol-blue white magenta.png (Pymol blue_white_magenta colorbar)
- 20:32, 29 November 2011 James talk contribs uploaded File:Pymol-blue white green.png (Pymol blue_white_green colorbar)
- 20:30, 29 November 2011 James talk contribs uploaded File:Pymol-blue magenta.png (Pymol blue_magenta colorbar)
- 19:19, 29 November 2011 James talk contribs uploaded File:Colorbar-blue green.png (Pymol blue_green colorbar)
- 19:09, 29 November 2011 James talk contribs uploaded File:Pymol-blue red.png (Pymol blue_red colorbar)
- 19:07, 29 November 2011 James talk contribs uploaded a new version of File:Pymol-rainbow.png (Pymol rainbow colorbar)
- 19:06, 29 November 2011 James talk contribs uploaded File:Pymol-red blue.png (Pymol red_blue colorbar)
- 13:27, 18 November 2011 Inchoate talk contribs uploaded File:Abs surf.png (abstracted surface colored by underlying b-factors and shown with ligand)
- 12:52, 18 November 2011 Inchoate talk contribs uploaded File:Gallery blob sc.png (Blobby side chains on cartoon tube)
- 12:52, 18 November 2011 Inchoate talk contribs uploaded File:Gallery dark tube mc.png (Darkened tube main chain)
- 17:12, 1 November 2011 Cmura talk contribs uploaded a new version of File:MuraEtAl PLoS BiomolGraphics SuppFigS3 01nov2011 erratum.pdf
- 17:09, 1 November 2011 Cmura talk contribs uploaded File:MuraEtAl PLoS BiomolGraphics SuppFigS3 01nov2011 erratum.pdf (updated version of Fig S3b,c and legend)
- 18:59, 11 October 2011 James talk contribs uploaded File:Pymol-rainbow.png (Pymol rainbow colorbar)
- 19:41, 7 October 2011 Inchoate talk contribs uploaded File:Polymer physics cover.png
- 19:41, 7 October 2011 Inchoate talk contribs uploaded File:Biophysical cover.png
- 13:00, 3 October 2011 Inchoate talk contribs uploaded File:Pymol.pdf (3D PDF file made w/PyMOL, u3d converter and LaTeX.)
- 12:05, 29 September 2011 Inchoate talk contribs uploaded File:Science 2011 16.jpg (Cover of Science, Sept 16, 2011.)
- 23:52, 17 September 2011 Inchoate talk contribs uploaded File:Spectrum ex2.png (example by atom count)
- 23:49, 17 September 2011 Inchoate talk contribs uploaded File:Spectrum example.png (Shows coloring by modified b-factor as distance from origin.)
- 17:10, 31 August 2011 Inchoate talk contribs uploaded File:Wood.png (Wooden like rendering.)
- 19:42, 29 August 2011 Tlinnet talk contribs uploaded File:Rotkitex2.png
- 19:42, 29 August 2011 Tlinnet talk contribs uploaded File:Rotkitex1.png
- 09:56, 24 August 2011 Tlinnet talk contribs uploaded File:Surfaceatoms.png
- 05:36, 24 August 2011 Tlinnet talk contribs uploaded File:3-ALEXA488Emi-ALEXA633Exi-overlap-integral.png
- 05:35, 24 August 2011 Tlinnet talk contribs uploaded File:2-ALEXA488Emi-ALEXA633Exi-overlap-normalized-spectre.png
- 05:35, 24 August 2011 Tlinnet talk contribs uploaded File:1-ALEXA488Emi-ALEXA633Exi-overlap-all-spectre.png
- 05:31, 24 August 2011 Tlinnet talk contribs uploaded File:1-ALEXA488Emi-ALEXA633Exi-overlap-all-spectre.pdf
- 18:13, 20 August 2011 Tlinnet talk contribs uploaded File:Resultslog.png
- 18:09, 20 August 2011 Tlinnet talk contribs uploaded File:Pymolpropkamenu.png (The easy click menu from propka script)
- 18:07, 20 August 2011 Tlinnet talk contribs uploaded File:Propka1HP1-ZN.png
- 18:05, 20 August 2011 Tlinnet talk contribs uploaded File:Propka1HP1-ATP.png (propka on 1HP1, zoom on ATP)
- 18:03, 20 August 2011 Tlinnet talk contribs uploaded File:Propka1HP1.png (propka on 1HP1)
- 17:58, 20 August 2011 Tlinnet talk contribs uploaded File:Propka4INS.png (propka on 4INS)
- 17:50, 20 August 2011 Tlinnet talk contribs uploaded File:Propkamenu3.png
- 17:43, 20 August 2011 Tlinnet talk contribs uploaded File:Propka1hp13zoom2.png
- 17:41, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Pkavalues.png (Reverted to version as of 21:39, 20 August 2011)
- 17:39, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Pkavalues.png (Reverted to version as of 21:38, 20 August 2011)
- 17:39, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Pkavalues.png (Reverted to version as of 21:37, 20 August 2011)
- 17:38, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Pkavalues.png
- 17:37, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Pkavalues.png (Reverted to version as of 21:37, 20 August 2011)
- 17:37, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Pkavalues.png (Reverted to version as of 21:36, 20 August 2011)
- 17:37, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Pkavalues.png
- 17:36, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Pkavalues.png
- 17:35, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Menu.png (Reverted to version as of 21:35, 20 August 2011)
- 17:35, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Menu.png
- 17:35, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Menu.png
- 17:34, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Propka1hp12.png
- 17:33, 20 August 2011 Tlinnet talk contribs uploaded a new version of File:Propka4ins2.png
- 15:43, 17 August 2011 Inchoate talk contribs uploaded File:Fa2.png (focused alignment after)
- 15:42, 17 August 2011 Inchoate talk contribs uploaded File:Fa.png (focused alignment before)
- 06:05, 15 August 2011 Tlinnet talk contribs uploaded File:Pkavalues.png (The atoms are labelled with the pka values)
- 06:03, 15 August 2011 Tlinnet talk contribs uploaded a new version of File:Menu.png
- 05:55, 15 August 2011 Tlinnet talk contribs uploaded File:Menu.png (Example of menu when running propka.py)
- 05:54, 15 August 2011 Tlinnet talk contribs uploaded File:Propka1hp12.png (fetch 1hp1, async=0 propka molecule=1hp1, chain=A, resi=308.513, resn=CYS, logtime=_, verbose=no, showresult=no)
- 05:54, 15 August 2011 Tlinnet talk contribs uploaded File:Propka4ins2.png (Example of propka.py script. run ./propka.py fetch 4ins, async=0 propka molecule=4ins, chain=*, resi=19.20, resn=ASP.TYR, logtime=_, verbose=yes, showresult=no)
- 16:37, 14 August 2011 Tlinnet talk contribs uploaded File:Results log.png (Example of the logfile output from propka.py script. The inputs are saved to the log file, with the interesting residues specified with resi= and resn=)
- 16:24, 14 August 2011 Tlinnet talk contribs uploaded File:Propka1hp1.png (fetch 1hp1, async=0 propka molecule=1hp1, chain=A, resi=308.513, resn=CYS, logtime=_, verbose=no, showresult=no)
- 16:19, 14 August 2011 Tlinnet talk contribs uploaded File:Propka4ins.png (Example of propka.py script. run ./propka.py fetch 4ins, async=0 propka molecule=4ins, chain=*, resi=19.20, resn=ASP.TYR, logtime=_, verbose=yes, showresult=no)
- 14:46, 4 August 2011 Tlinnet talk contribs uploaded File:O5NT-C5NT-CA-dist-backbone.png
- 12:24, 29 July 2011 Inchoate talk contribs uploaded File:Capsid by dist.png (capsid colored by distance from center)
- 15:04, 28 July 2011 Inchoate talk contribs uploaded File:Measure.png (Surface colored by distance.)
- 12:48, 18 July 2011 Inchoate talk contribs uploaded File:Multilayer.png
- 12:48, 18 July 2011 Inchoate talk contribs uploaded a new version of File:Unilayer.png
- 12:46, 18 July 2011 Inchoate talk contribs uploaded File:Unilayer.png (Unilayer transparency on)
- 04:48, 20 June 2011 Jarl.Underhaug talk contribs uploaded File:JExpBiol-214-4.jpg (Cover of The Journal of Experimental Biology 214(4))
- 18:47, 17 June 2011 EricEscobar talk contribs uploaded File:Structure cover Dec2010.jpg (Cover of the journal Structure from December 2010, obtained from: http://download.cell.com/images/journalimages/0969-2126/S0969212610X00132_covhighres.jpg)
- 20:24, 15 June 2011 Inchoate talk contribs uploaded File:Focal blur ex6.png
- 20:23, 15 June 2011 Inchoate talk contribs uploaded File:Focal blur ex ap3.png
- 20:23, 15 June 2011 Inchoate talk contribs uploaded File:Focal blur ex ap3 mode3.png
- 20:23, 15 June 2011 Inchoate talk contribs uploaded File:Focal blur ex ap3 mode2.png
- 20:23, 15 June 2011 Inchoate talk contribs uploaded File:Focal blur ex ap3 mode1.png
- 08:50, 9 June 2011 Jarl.Underhaug talk contribs uploaded File:FEBS-585-8.png (FEBS Lett., Volume 585, Issue 8)
- 21:21, 8 June 2011 Inchoate talk contribs uploaded File:MolecularCell011.jpg
- 07:24, 8 June 2011 Jarl.Underhaug talk contribs uploaded File:FocalBlur optimal sampling.png (Optimal sampling?)
- 07:24, 8 June 2011 Jarl.Underhaug talk contribs uploaded File:FocalBlur current sampling.png (Current aperture sampling used by FocalBlur)
- 04:21, 7 June 2011 Jarl.Underhaug talk contribs uploaded File:FocalBlur a4.0 r0.png (FocalBlur(aperture=4,samples=400,raytrace=False))
- 04:20, 7 June 2011 Jarl.Underhaug talk contribs uploaded File:FocalBlur a4.0 r1.png (FocalBlur(aperture=4,samples=400,raytrace=True))
- 04:19, 7 June 2011 Jarl.Underhaug talk contribs uploaded File:FocalBlur a2.0 r1.png (FocalBlur(aperture=2,samples=100,raytrace=True))
- 04:19, 7 June 2011 Jarl.Underhaug talk contribs uploaded File:FocalBlur a1.0 r1.png (FocalBlur(aperture=1,samples=100,raytrace=True))
- 13:16, 27 May 2011 Inchoate talk contribs uploaded File:Chroma 3d5.png
- 13:16, 27 May 2011 Inchoate talk contribs uploaded File:Chroma 3d4.png
- 13:16, 27 May 2011 Inchoate talk contribs uploaded File:Chroma 3d3.png
- 13:16, 27 May 2011 Inchoate talk contribs uploaded File:Chroma 3d2.png
- 13:16, 27 May 2011 Inchoate talk contribs uploaded File:Chroma 3d.png
- 14:25, 21 May 2011 Inchoate talk contribs uploaded File:Cen.jpg
- 21:53, 19 May 2011 Inchoate talk contribs uploaded File:Ann.png
- 23:44, 27 April 2011 Inchoate talk contribs uploaded File:Depthmol.mpeg (depth enhanced ambient occlusion-like movie)
- 12:38, 25 April 2011 Inchoate talk contribs uploaded File:Tp ribbon.png (transparent ribbons)
- 20:01, 24 April 2011 Hongbo zhu talk contribs uploaded File:Demo DSSP Stride plugin 1pyg.png
- 15:25, 22 April 2011 Inchoate talk contribs uploaded File:Selection roundpts1.png (round points on)
- 15:25, 22 April 2011 Inchoate talk contribs uploaded File:Selection overaly1.png (selection indicators overlay atoms)
- 15:24, 22 April 2011 Inchoate talk contribs uploaded File:Selection overaly0.png (selection overlays atoms (off))
- 09:54, 20 April 2011 Cmalisi talk contribs uploaded a new version of File:Color by mutation.png
- 09:53, 20 April 2011 Cmalisi talk contribs uploaded a new version of File:Color by mutation.png
- 09:50, 20 April 2011 Cmalisi talk contribs uploaded File:Color by mutation.png (example for script color_by_mutation)
- 09:28, 13 April 2011 Hongbo zhu talk contribs uploaded a new version of File:Demo DSSP plugin 1pyg.png (Reverted to version as of 13:26, 13 April 2011)
- 09:28, 13 April 2011 Hongbo zhu talk contribs uploaded a new version of File:Demo DSSP plugin 1pyg.png
- 09:26, 13 April 2011 Hongbo zhu talk contribs uploaded a new version of File:Demo DSSP plugin 1pyg.png
- 10:00, 12 April 2011 Hongbo zhu talk contribs uploaded File:Demo DSSP plugin 1pyg.png
- 12:59, 11 April 2011 Inchoate talk contribs uploaded File:Bg grad.png (background gradient)
- 12:56, 11 April 2011 Inchoate talk contribs uploaded File:Screen shot 2011-04-11 at 12.55.49 PM.png (Example image with the bg_gradient set.)
- 02:12, 8 April 2011 Inchoate talk contribs uploaded File:Shade.png (ray_direct_shade on)
- 02:11, 8 April 2011 Inchoate talk contribs uploaded File:No shade.png (ray_direct_shade off)
- 02:04, 8 April 2011 Inchoate talk contribs uploaded File:Ray blend red.png (red blended out)
- 02:03, 8 April 2011 Inchoate talk contribs uploaded File:Ray blend off.png (ray blend off)
- 14:55, 31 March 2011 Speleo3 talk contribs uploaded File:Radius of gyration Example.png
- 08:12, 27 March 2011 Mretegan talk contribs uploaded File:Axes demo.png (Demo for a simple cartesian coordinate system.)
- 13:18, 19 March 2011 Hongbo zhu talk contribs uploaded File:Example.png (Demonstration of MSMS plugin for PyMOL (PDB: 1acb))
- 13:54, 16 March 2011 DBorhani talk contribs uploaded File:Slice example 2.png (Slice example #2)
- 13:53, 16 March 2011 DBorhani talk contribs uploaded File:Slice example 2 screenshot.png (Pymol screen shot of slice example #2)
- 02:47, 5 March 2011 Inchoate talk contribs uploaded File:Rnt.png (Ray-normal transparency example)
- 23:33, 2 March 2011 Inchoate talk contribs uploaded File:Highlight ss1.png (example of common highlighted secondary structures)
- 15:11, 22 February 2011 Speleo3 talk contribs uploaded File:SidechaincentersExample.png
- 09:53, 18 February 2011 Speleo3 talk contribs uploaded File:SpectrumanyExample.png (Coloring with different green shades, created with: import spectrumany fetch 2xwu, async=0 remove chain A or solvent spectrumany count, cyan greencyan yellow green forest 0x002000 viewport 800,600 orient zoom buffer=4 bg white dss as cartoon png spectruma)
- 09:34, 18 February 2011 Speleo3 talk contribs uploaded File:AAindexExample.png (created with: import aaindex, spectrumany fetch 2xwu, async=0 remove chain B or solvent aaindex2b KYTJ820101 spectrumany b, white limon green forest viewport 800,600 orient zoom buffer=4 bg white set surface_solvent show surface png aaindex-KYTJ820101.png)
- 15:43, 15 February 2011 Inchoate talk contribs uploaded File:Salam.jpg (mol. micro. Volume 79, Feb, 2011)
- 16:06, 8 February 2011 Inchoate talk contribs uploaded File:Map set ex.png (Example consensus volume of the aligned ligands.)
- 10:39, 1 February 2011 Inchoate talk contribs uploaded File:Apbs ex.png (Side-by-side map comparisons)
- 22:45, 24 January 2011 LottaUnderwood talk contribs uploaded File:Cocaine 2050.jpg
- 17:31, 24 January 2011 Cigo86 talk contribs uploaded File:AngewChemIntEd Comm Cover R Cighetti.jpg (Image realized by Roberto Cighetti with PyMOL (Version 1.2r1) and GIMP (Version 2.6.8) http://onlinelibrary.wiley.com/doi/10.1002/anie.201004655/abstract )
- 17:03, 24 January 2011 Cigo86 talk contribs uploaded File:R Cighetti AngewChemCover.gif (Communication Cover on Angewandte Chemie, 2011, 50, 622-626 Picture made by Roberto Cighetti with PyMOL (The PyMOL Molecular Graphics System, Version 1.2r1, Schrödinger, LLC) and GIMP (GNU Image Manipulation Program, version 2.6.8) from PDB ID: 3FXI (for)
- 12:15, 7 January 2011 Tlinnet talk contribs uploaded File:O5NT-C5NT-CA-dist-menu.png (DisplacementMap parses best suggestions back to pymol as new objects. Command used: DisplacementMap O5NT, C5NT, CA, 40.0, 15.0, 10)
- 12:11, 7 January 2011 Tlinnet talk contribs uploaded File:O5NT-C5NT-CA-dist.png (DisplacementMap parses best suggestions back to pymol as new objects. Command used: DisplacementMap O5NT, C5NT, CA, 40.0, 15.0, 10)
- 12:07, 7 January 2011 Tlinnet talk contribs uploaded File:O5NT-C5NT-CA-dist-gnuplot.png (DisplacementMap gnuplot of data-matrix. Command: DisplacementMap O5NT, C5NT, CA, 40.0, 15.0, 10)
- 17:44, 5 January 2011 Tlinnet talk contribs uploaded File:ColorByDisplacement-All-2.png (ColorByDisplacementAll used on 5'-nucleotidase (pdb:1HP1 and pdb:1HPU))
- 17:43, 5 January 2011 Tlinnet talk contribs uploaded File:ColorByDisplacement-All-1.png (ColorByDisplacementAll used on 5'-nucleotidase (pdb:1HP1 and pdb:1HPU))
- 17:29, 5 January 2011 Tlinnet talk contribs uploaded File:ColorByDisplacement-CA-2.png (ColorByDisplacementCA used on 5'-nucleotidase (pdb:1HP1 and pdb:1HPU))
- 17:28, 5 January 2011 Tlinnet talk contribs uploaded File:ColorByDisplacement-CA-1.png (ColorByDisplacement used on 5'-nucleotidase (pdb:1HP1 and pdb:1HPU))
- 16:30, 3 January 2011 Cmura talk contribs uploaded File:PLoS BiomolGraph 2010 InputFiles.tar.bz2
- 19:14, 26 December 2010 Tlinnet talk contribs uploaded a new version of File:O5NT-1HP1-A-C5NT-1HPU-C-CA-dist-map.png (DisplacementMap gnuplot of data-matrix)
- 19:12, 26 December 2010 Tlinnet talk contribs uploaded File:O5NT-1HP1-A-C5NT-1HPU-C-CA-dist-map.png (DisplacementMap gnuplot of data-matrix)
- 19:07, 26 December 2010 Tlinnet talk contribs uploaded File:O5NT-1HP1-A-C5NT-1HPU-C-CA-dist.png (DisplacementMap pymol output)
- 12:07, 21 December 2010 Osunazamyxa talk contribs uploaded File:Free-credit-scores.pdf
- 12:06, 21 December 2010 Osunazamyxa talk contribs uploaded File:Emergency-cash.pdf
- 12:01, 21 December 2010 Osunazamyxa talk contribs uploaded File:Credit-services.pdf
- 12:51, 2 December 2010 Inchoate talk contribs uploaded File:Anaglyph1.png
- 04:54, 9 November 2010 Hci talk contribs uploaded File:Ukazky-plugin.png
- 04:53, 9 November 2010 Hci talk contribs uploaded File:Ukazky.png
- 04:52, 9 November 2010 Hci talk contribs uploaded File:Ukazky-plugin.PNG
- 04:35, 9 November 2010 Hci talk contribs uploaded File:Caver plugin2.png
- 04:35, 9 November 2010 Hci talk contribs uploaded File:Caver plugin1.png
- 23:27, 19 October 2010 Inchoate talk contribs uploaded File:1rmv fiber.png (1RMV fiber, showing BiologicalUnit at work.)
- 05:00, 8 October 2010 Karo talk contribs uploaded File:Orthoon2.png (set orthoscopic, on (PDB code: 3AEH))
- 04:59, 8 October 2010 Karo talk contribs uploaded File:Orthooff2.png (set orthoscopic, off (PDB code: 3AEH))
- 04:58, 8 October 2010 Karo talk contribs uploaded File:Orthoon.png (set orthoscopic, on (PDB code 3AEH))
- 04:56, 8 October 2010 Karo talk contribs uploaded a new version of File:Orthooff.png
- 04:44, 8 October 2010 Karo talk contribs uploaded File:Orthooff.png (PDB code 3AEH set orthoscopic, off)
- 21:40, 5 October 2010 MW talk contribs uploaded File:MMcoverMay2009.png
- 21:33, 5 October 2010 MW talk contribs uploaded File:MMcoverMay2009.gif
- 11:47, 29 September 2010 Speleo3 talk contribs uploaded a new version of File:PyMOLreferenceCard.zip (fix some commas fix 'near' and 'within' fix cartoon commands)
- 11:32, 29 September 2010 Inchoate talk contribs uploaded File:PyMOLreferenceCard-test.zip (test)
- 07:37, 29 September 2010 Speleo3 talk contribs uploaded a new version of File:PymolRef.pdf (fix some commas fix 'near' and 'within' fix cartoon commands)
- 17:49, 28 September 2010 Inchoate talk contribs uploaded File:Rtg10.png (zoomed in and ray trace gain, 10)
- 17:49, 28 September 2010 Inchoate talk contribs uploaded File:Rtg0.png (ray trace gain, 0)
- 17:49, 28 September 2010 Inchoate talk contribs uploaded File:Rtgd.png (ray trace gain, default)
- 17:45, 28 September 2010 Inchoate talk contribs uploaded File:Rsch1.png (ribbon side chain helper on)
- 17:45, 28 September 2010 Inchoate talk contribs uploaded File:Rsch0.png (Ribbon side chain helper off)
- 18:19, 15 September 2010 Inchoate talk contribs uploaded File:Surface residues ex.png
- 09:20, 13 September 2010 Inchoate talk contribs uploaded File:Helix orientation2.png (helix angle.)
- 09:15, 13 September 2010 Inchoate talk contribs uploaded File:Helix orientation1.png (example helix orientation)
- 13:29, 7 September 2010 Jaredsampson talk contribs uploaded File:1hiw orient2.png (Demonstration of orient command with 1hiw, two trimers shown.)
- 13:15, 7 September 2010 Jaredsampson talk contribs uploaded File:1hiw orient.png (Demonstration of orient command with NCS symmetry of PDB 1hiw.)
- 12:02, 25 August 2010 Baker1 talk contribs uploaded File:Extend3.png (select (1kao and resi 64 and n. cz) extend 3)
- 12:02, 25 August 2010 Baker1 talk contribs uploaded File:Extend1.png (select (1kao and resi 64 and n. cz) extend 1)
- 11:59, 25 August 2010 Baker1 talk contribs uploaded File:Extend0.png (select (1kao and resi 64 and n. cz))
- 11:04, 21 July 2010 Speleo3 talk contribs uploaded File:SupercellExample.png (fetch 2x19 supercell 1,1,2,2x19,withmates=1 disable 2x19 as ribbon, m*)
- 16:33, 19 July 2010 Krapnik talk contribs uploaded File:KscA.png (MOLE found six channels in the open KscA K+ channel structure (PDB: 1k4c). From top one can distinguish the selectivity filter (with botlleneck radius 0.82 Å), cavity and channel gating (with bottleneck radius of 1.36 Å). Four perpendicular channels (le)
- 13:07, 30 June 2010 Mretegan talk contribs uploaded a new version of File:BeCl2.png (Electron localization function for BeCl2)
- 13:05, 30 June 2010 Mretegan talk contribs uploaded File:H2O.png (Electron localization function for H2O)
- 13:05, 30 June 2010 Mretegan talk contribs uploaded File:BeCl2.png (Electron localization function for the BeCl2)
- 18:13, 28 June 2010 Inchoate talk contribs uploaded File:Surface by prop3.png
- 18:13, 28 June 2010 Inchoate talk contribs uploaded File:Surface by prop2.png
- 18:13, 28 June 2010 Inchoate talk contribs uploaded File:Surface by prop.png
- 14:34, 28 June 2010 Inchoate talk contribs uploaded File:BbPlane1.png (bbplane ex1)
- 14:33, 28 June 2010 Inchoate talk contribs uploaded File:BbPlane2.png (bbplane ex 2)
- 14:33, 28 June 2010 Inchoate talk contribs uploaded File:BbPlane3.png (bbplane ex. 3)
- 10:17, 9 June 2010 Inchoate talk contribs uploaded File:Tilt shift.png (Example of simulating tilt-shift.)
- 02:01, 25 May 2010 Sobol talk contribs uploaded File:101209Nature.jpg (Glutamate Receptor)
- 13:02, 28 April 2010 Bhintze talk contribs uploaded File:ModifyPDB all.png (Modify_PDB windows)
- 12:12, 28 April 2010 Bhintze talk contribs uploaded File:RestraintDefinerView.png (Restraint Definer View)
- 12:07, 28 April 2010 Bhintze talk contribs uploaded File:Figure1.png (Restraint Definer View)
- 08:55, 28 April 2010 Bhintze talk contribs uploaded File:ResDe logo lq.jpg (ResDe logo)
- 23:38, 15 April 2010 Inchoate talk contribs uploaded File:After.png (After manual symexp.)
- 23:37, 15 April 2010 Inchoate talk contribs uploaded File:Before.png (Before manual symexp.)
- 19:34, 31 March 2010 Inchoate talk contribs uploaded File:Sel orig.png (Original selection.)
- 19:34, 31 March 2010 Inchoate talk contribs uploaded File:Sel hi.png
- 19:32, 31 March 2010 Inchoate talk contribs uploaded File:Sel lo.png
- 14:38, 25 March 2010 SchneiderKD talk contribs uploaded File:Biochem 010110 cover.jpg (Biochemistry cover from Jan 1st to Apr 1st.)
- 22:10, 24 March 2010 Inchoate talk contribs uploaded File:Map double3.png
- 22:09, 24 March 2010 Inchoate talk contribs uploaded File:Map double2.png
- 22:08, 24 March 2010 Inchoate talk contribs uploaded File:Map double.png
- 22:07, 24 March 2010 Inchoate talk contribs uploaded File:Map normal.png (map at normal mesh)
- 10:53, 19 March 2010 Inchoate talk contribs uploaded File:Gslike.png
- 00:39, 2 March 2010 Inchoate talk contribs uploaded File:CircleR2.png (Donut, width=150.)
- 00:33, 2 March 2010 Inchoate talk contribs uploaded File:CircleR.png
- 01:09, 13 February 2010 Inchoate talk contribs uploaded File:Elines.png (Electronic field lines.)
- 16:39, 28 January 2010 Natechols talk contribs uploaded File:Jbc 20070413.gif (JBC cover, April 13 2007)
- 19:30, 16 January 2010 Inchoate talk contribs uploaded File:Jbc mchu.jpeg (Structure of the human mitotic checkpoint kinase Mps1 catalytic domain apo form (top) and inhibitor SP600125-bound form (bottom). "Crystal structure of the catalytic domain of the mitotic checkpoint kinase Mps1 in complex with SP600125. Chu ML, Chavas LM)
- 21:35, 12 January 2010 Inchoate talk contribs uploaded File:Scm1.png (Surface cavity 1)
- 21:34, 12 January 2010 Inchoate talk contribs uploaded File:Scm0.png (Surface cavity 0)
- 00:37, 10 January 2010 Cmccrimm talk contribs uploaded File:SvdEm.jpg (Fig. 6)
- 21:38, 30 December 2009 Sawaya talk contribs uploaded File:Movie.gif (movie of a helicase unwinding DNA)
- 21:26, 30 December 2009 Sawaya talk contribs uploaded File:Interface02 labeled.png (Interface of PE-PPE complex)
- 20:30, 30 December 2009 Sawaya talk contribs uploaded File:Density-stereo.png (electron density map of dUTPase)
- 19:54, 30 December 2009 Sawaya talk contribs uploaded File:Overlay03.png (overlay of alpha carbon traces of LovD)
- 20:26, 29 December 2009 Sawaya talk contribs uploaded File:Dutpase active02-labeled.png (Active Site image of dUTPase)
- 20:01, 29 December 2009 Sawaya talk contribs uploaded File:Csos3-stereo01.png (stereo image of CsoS3 fold)
- 19:36, 29 December 2009 Sawaya talk contribs uploaded File:JBC 080406 no31 proof.png (DaLoop Cover of JBC, Augus 4, 2006.)
- 18:35, 29 December 2009 Sawaya talk contribs uploaded File:Iapp.gif (Cover of Protein Science, September 2008)
- 14:08, 22 December 2009 Shiven talk contribs uploaded File:3IQS example.blend.bz2
- 12:44, 22 December 2009 Shiven talk contribs uploaded File:3IQS final.png
- 12:44, 22 December 2009 Shiven talk contribs uploaded File:Scr21.png
- 12:44, 22 December 2009 Shiven talk contribs uploaded File:Scr20.png
- 12:44, 22 December 2009 Shiven talk contribs uploaded File:Scr19.png
- 12:44, 22 December 2009 Shiven talk contribs uploaded File:Scr18.png