isomesh creates a mesh isosurface object from a map object.
Usage
isomesh name, map, level [,(selection) [,buffer [,state [,carve ]]]]
- name = str: the name for the new mesh isosurface object.
- map = str: the name of the map object to use for computing the mesh.
- level = float: the contour level (in sigma units) {default: 1.0}
- selection = str: an atom selection about which to display the mesh with an additional "buffer" (if provided).
- buffer = float: (see selection)
- state = int: the state into which the object should be loaded (default=1) (set state=0 to append new mesh as a new state) {default: 1}
- carve = float: a radius about each atom in the selection for which to include density. If "carve" is not provided, then the whole brick is displayed.
Example
<source lang="python">
fetch 6sps
fetch 6sps, type=2fofc
- mesh for entire map object
isomesh mesh_all, 6sps_2fofc
- mesh within bounding box of ligand, enlarged by 2 Angstrom
isomesh mesh_ligand, 6sps_2fofc, selection=(resn LR5), buffer=2
- mesh only ..→
