Difference between revisions of "Main Page"

Revision as of 23:16, 2 January 2016

Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
New accounts: email jason (dot) vertrees (@) gmail dot com

News & Updates
New Plugin	LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
Official Release	PyMOL v1.8.0 has been released on Nov 18, 2015.
PyMOL Open-Source Fellowship	Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship
Official Release	PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015.
New Plugin	PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
New Plugin	Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin	MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce	PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
Older News	See Older News.

Did you know...
Create create creates a new molecule object from a selection. It can also be used to create states in an existing object. USAGE create name, (selection) [, source_state [, target_state ]] name = object to create (or modify) selection = atoms to include in the new object source_state (default: 0 - copy all states) target_state = int: -1 appends after last state {default: 0} PYMOL API cmd.create(string name, string selection, int source_state, int target_state,int discrete) NOTES If the source and target states are zero (default), all states will be copied. Otherwise, only the indicated states will be copied. Target state -1 will append new states. User Comments/Examples EXAMPLES <source lang="python"> merging two multi-state objects with the create command obj1 has 25 states and obj2 has 40 states load multi_state_obj1, obj1 load multi_state_obj2, obj2 merge the two multi-state objects back to back into obj3 0 ..→

A Random PyMOL-generated Cover. See Covers.

@@ Line 57: / Line 57: @@
 |-
 |<div class="didyouknow" >
-<DPL>
+<DynamicPageList>
 namespace=
 category=Commands|Plugins|Script_Library|Settings
@@ Line 65: / Line 65: @@
 resultsheader=__NOTOC__ __NOEDITSECTION__
 randomcount=1
-mode=userformat
-addpagecounter=true
 listseparators=,<h3>[[%PAGE%]]</h3>,,\n
-</DPL>
+</DynamicPageList>
 </div>
 <div style="clear: both;"></div>
@@ Line 74: / Line 72: @@
 |
 |style="vertical-align: top; width: 18%"|
-<DPL>
+<DynamicPageList>
 imagecontainer=Covers
 randomcount=1
@@ Line 81: / Line 79: @@
 listseparators=[[,%PAGE%,|thumb|185px|A Random PyMOL-generated Cover.  See [[Covers]].]],\n
 ordermethod=none
-</DPL>
+</DynamicPageList>
 |}