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News & Updates Official Release PyMOL v2.3 has been released on February 11, 2019. POSF New PyMOL fellows announced for 2018-2019 Tutorial Plugins Tutorial updated for PyQt5 New Plugin ProBiS H2O is a new plugin for identification of conserved waters in protein structures. Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll! Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons Older News See Older News.

Did you know... Msms surface Included in psico This command or function is available from psico, which is a PyMOL extension. Module psico.msms msms_surface calculates a molecular surface with MSMS and loads it into PyMOL as a CGO. Installation msms_surface is available from the psico package and requires the msms binary. All dependencies are available from Anaconda Cloud: conda install -c schrodinger pymol conda install -c schrodinger pymol-psico conda install -c bioconda -c speleo3 msms Usage msms_surface [ selection [, state [, density [, name [, atomcolors [, exe [, preserve ]]]]]]] Arguments selection = str: atom selection {default: polymer} state = int: object state {default: 1} density = float: MSMS surface point density {default: 3} name = str: name of CGO object to create atomcolors = 0/1: color surface by atom colors {default: 0} exe = str: path to msms binary {default: find in $PATH} preserve = 0/1: don't ..→

A Random PyMOL-generated Cover. See Covers.