Difference between revisions of "Intra fit"
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===DESCRIPTION=== | ===DESCRIPTION=== | ||
| − | + | "intra_fit" fits all states of an object to an atom selection in the specified state. It returns the rms values to python as an array. | |
| − | |||
| − | |||
===USAGE=== | ===USAGE=== | ||
| − | + | intra_fit (selection),state | |
===PYMOL API=== | ===PYMOL API=== | ||
| − | + | <source lang="python"> | |
| + | cmd.intra_fit( string selection, int state ) | ||
| + | </source> | ||
===EXAMPLES=== | ===EXAMPLES=== | ||
| − | + | intra_fit ( name ca ) | |
| − | + | ||
===PYTHON EXAMPLE=== | ===PYTHON EXAMPLE=== | ||
<source lang="python"> | <source lang="python"> | ||
| Line 21: | Line 21: | ||
===USER EXAMPLES=== | ===USER EXAMPLES=== | ||
| + | ===USER COMMENTS=== | ||
| + | See [[Intra_Rms]] for selection caveats for this group of commands. | ||
| + | |||
===SEE ALSO=== | ===SEE ALSO=== | ||
| − | + | [[Fit]], [[Rms]], [[Rms_Cur]], [[Intra_Rms]], [[Intra_Rms_Cur]], [[Pair_Fit]] | |
| − | |||
[[Category:Commands|intra_fit]] | [[Category:Commands|intra_fit]] | ||
Revision as of 09:37, 16 May 2005
DESCRIPTION
"intra_fit" fits all states of an object to an atom selection in the specified state. It returns the rms values to python as an array.
USAGE
intra_fit (selection),state
PYMOL API
cmd.intra_fit( string selection, int state )
EXAMPLES
intra_fit ( name ca )
PYTHON EXAMPLE
from pymol import cmd
rms = cmd.intra_fit("(name ca)",1)
USER EXAMPLES
USER COMMENTS
See Intra_Rms for selection caveats for this group of commands.
SEE ALSO
Fit, Rms, Rms_Cur, Intra_Rms, Intra_Rms_Cur, Pair_Fit