Difference between revisions of "Dssp stride"

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[http://swift.cmbi.ru.nl/gv/dssp/ DSSP] is a popular tool for assigning secondary structures for proteins. DSSP Plugin for PyMOL provides a graphical user interface for coloring proteins according to their secondary structures assigned by DSSP. Most recent DSSP Plugin code can be obtained from [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py this link].
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[http://swift.cmbi.ru.nl/gv/dssp/ DSSP] and [http://webclu.bio.wzw.tum.de/stride/ Stride] are popular tools for assigning secondary structures for proteins. DSSP & Stride Plugin for PyMOL provides a graphical user interface for coloring proteins according to their secondary structures assigned by DSSP or Stride. Most recent DSSP & Stride Plugin code can be obtained from [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py this link].
  
 
= Reference =
 
= Reference =

Revision as of 04:35, 12 April 2012

Introduction

Type PyMOL Plugin
Download plugins/dssp_stride.py
Author(s) Hongbo Zhu
License -
This code has been put under version control in the project Pymol-script-repo

DSSP and Stride are popular tools for assigning secondary structures for proteins. DSSP & Stride Plugin for PyMOL provides a graphical user interface for coloring proteins according to their secondary structures assigned by DSSP or Stride. Most recent DSSP & Stride Plugin code can be obtained from this link.

Reference

Demonstration of DSSP plugin (pdb:1pyg).

https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/dssp_stride.py

http://www.biotec.tu-dresden.de/~hongboz/dssp_pymol/dssp_pymol.html