Editing Fetching scripts (section)

= Github repository =
To download and update github scripts

Make a text file "github.sh" and make it executable
<source lang="bash">
chmod u+x github.sh
</source>

Put this in the file, modify the first 2 lines
<source lang="bash">
#!/bin/bash -e
pymolscripts=/home/tlinnet/Software/pymol/Pymol-script-repo
pymoldir=/home/tlinnet/Software/pymol

if [ -d $pymolscripts ]; then
echo "### Script library exist, updating it ###"
cd $pymolscripts
git pull
fi

if [ ! -d $pymolscripts ]; then
echo "### Script library does not exist, downloading it ###"
sudo apt-get install git
git clone https://github.com/tlinnet/Pymol-script-repo.git $pymolscripts
t="'"
if grep -Fxq "import sys" ~/.pymolrc
then
echo "# 'import sys' already exist in ~/.pymolrc #"
else
echo "# Adding 'import sys' to ~/.pymolrc #"
echo "import sys" >> ~/.pymolrc
fi
if grep -Fxq "sys.path.append($t$pymolscripts$t)" ~/.pymolrc
then
echo "# sys.path.append($t$pymolscripts$t) already exist in ~/.pymolrc #"
else
echo "# adding sys.path.append($t$pymolscripts$t) to ~/.pymolrc #"
echo "sys.path.append($t$pymolscripts$t)" >> ~/.pymolrc
fi
fi
</source>
== Changes to Github repository ==
You can do it online, https://github.com/tlinnet/Pymol-script-repo

Make yourself a user on https://github.com/

Locate token at: Account settings -> Account admin -> API Token
Configure git
<source lang="bash">
git config --global user.name "Your Name"
git config --global user.email you@example.com
git config --global github.token 0123456789yourf0123456789token
cat ~/.gitconfig
git remote show origin
git remote set-url origin https://GITUSERNAME@github.com/GITUSERNAME/Pymol-script-repo.git
git remote show origin
</source>
And see cheat sheet here http://help.github.com/git-cheat-sheets/

Scheduling the editing or addition of all files to the next commit
<source lang="bash">
git add .
</source>
Checking the status of your repository
<source lang="bash">
git status
</source>
Committing files
<source lang="bash">
git commit -m "First import"
</source>
Push the changes to remote repository
<source lang="bash">
git push origin master
</source>

== Read more here ==
http://learn.github.com/p/intro.html

http://gitref.org/branching/#merge

https://github.com/features/projects/codereview

== Test to fetch script from github == 
<include src="https://github.com/tlinnet/Pymol-script-repo/blob/master/README" />