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== Examples == '''example #1''' <source lang="python"> distancesRH 2WHH, 25, 3.2, show=Y </source> Will show distances between all atoms of residue 25 in 2WHH and any atom within 3.2 Γ and return the result on screen (figure 1, left). <source lang="python"> distancesRH 2WHH, 25, 3.2, show=Y, aname=OD1, output=P </source> Same result as before, but only distances from atom OD1 are measured and shown. Results will be printed in 'distancesRH_25-OD1.txt' (figure 1, right). [[File:distancesRH_ex1.png|450px|example #1]] '''example #2''' <source lang="python"> distancesRH 1EFA, 901, 3.5, show=Y </source> Will show distances between all atoms in resi 901 of 1EFA and all atoms within 3.5 Γ (figure 2, left). <source lang="python"> distancesRH 1EFA, 901, 3.5, show=Y, Hbonds=Y </source> Distances will now be calculated between atoms that can form H bonds only (figure 2, right). [[File:distancesRH_ex2.png|450px|example #2]] '''example #3''' <source lang="python"> distancesRH 1EFA, 18, 4.7, chain=B, show=Y, aname=NE2 </source> Distances between atom NE2 of residue 19 in chain B of 1EFA and all atoms within 4.7 Γ (all of which are in the DNA fragment of chain D, figure 3). [[File:distancesRH_ex3.png|300px|example #3]]
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