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= Examples = <source lang="python"> # download the source and save as draw_rotation_axis.py run draw_rotation_axis.py fetch 2vak # calculate rotation axis between chains A and B draw_axis('chain A', 'chain B') </source> <gallery perrow=3 widths=350 heights=350> Image:2vak4.png |Rotation axis between chains A and B Image:2vak2.png |Some basic information is printed in the screen </gallery> <source lang="python"> # Another example, calculate the rotation axis of an homodimer run draw_rotation_axis.py fetch 3rfg # calculate rotation axis between chains A and B draw_axis('chain A', 'chain B') </source> <gallery perrow=3 widths=300 heights=300> Image:3rfg1.png |Rotation axis between chains A and B Image:3rfg4.png |Some basic information is printed in the screen </gallery> <source lang="python"> # Clearly, each of the domains are made up with motifs with internal symmetry draw_axis('resi 200-236 and chain A', 'resi 238-274 and chain A', 20, 0.6, 1, 0, 0, 1, 0, 0) # Also, you can create first the selections and use them to calculate the axis sele selection1, resi 200-236 and chain A sele selection2, resi 238-274 and chain A draw_axis('selection1', 'selection2', 20, 0.6, 1, 0, 0, 1, 0, 0) # will produce the same result. </source> <gallery perrow=3 widths=300 heights=300> Image:3rfg2.png |Internal rotation axis Image:3rfg3.png |Some basic information is printed in the screen </gallery> [[Category:Script_Library]] [[Category:Math_Scripts]] [[Category:Structural_Biology_Scripts]] [[Category:Pymol-script-repo]]
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