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Revision as of 11:21, 14 November 2018 by Speleo3 (talk | contribs) (Plugins Tutorial updated for PyQt5)
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News & Updates
Tutorial Plugins Tutorial updated for PyQt5
Official Release PyMOL v2.2 has been released on July 24, 2018.
POSF PyMOL Open-Source Fellowship program accepting applications for 2018-2019
New Plugin ProBiS H2O is a new plugin for identification of conserved waters in protein structures.
Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
Older News See Older News.
Did you know...

Slice

Screenshot of slice example #2

slice creates a slice object from a map object.

USAGE

slice_new name, map, [state, [source_state]]

or

slice name, map, [state, [source_state]]

ARGUMENTS

  • name = the name for the new slice object (string)
  • map = the name of the map object to use for computing the slice (string)
  • state = the state into which the object should be loaded (default=1; set state=0 to append new mesh as a new state)
  • source_state = the state of the map from which the object should be loaded (default=0)

EXAMPLES

<source lang="python">

  1. Create a map slice plane perpendicular to current view

slice a_new_slice, a_map


  1. A more complicated example that shows how to create multiple slices
  2. (in this case, 3 slices perpendicular to each other), each colored
  3. with a different color ramp and different contour levels:
  1. Reset the ..→
A Random PyMOL-generated Cover. See Covers.