Difference between revisions of "Main Page"

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! Python 3
 
! Python 3
 
| New [[2to3|Python 3 compatibility guide]] for scripts and plugins
 
| New [[2to3|Python 3 compatibility guide]] for scripts and plugins
|-
 
! Official Release
 
| [https://pymol.org PyMOL v2.3 has been released] on February 11, 2019.
 
 
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! POSF
 
! POSF

Revision as of 05:05, 5 March 2021

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Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
To request a new account, email SBGrid at: accounts (@) sbgrid dot org
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) Getting Help
News & Updates
Official Release PyMOL v2.4 has been released on May 20, 2020.
Python 3 New Python 3 compatibility guide for scripts and plugins
POSF New PyMOL fellows announced for 2018-2019
Tutorial Plugins Tutorial updated for PyQt5
New Plugin PICv is a new plugin for clustering protein-protein interactions and visualization with available data from PDBe
Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
Older News See Older News.
Did you know...

Jump

Type Python Script
Download jump.py
Author(s) Sean M. Law
License -
This code has been put under version control in the project Pymol-script-repo

Description

In the case of movies or simulation trajectories, it is often useful to quickly jump between different frames but not necessarily in any order. This script allows the user to specify a list of frames and flipping through the set of frames is controlled by a user-defined keystroke (limited to those available through the Set Key command). This script is a nice tool for identifying different protein states from a simulation and can be used in conjunction with the Modevectors script in a very useful way by first characterizing the directionality of the movements (using Modevectors) and then visualizing the change directly using this script.

Note: This script also requires the Check Key script!


Usage

load the script using the run command

jump [frame1 [,...frameN [,sleep=0.1 [,x=1 [,key='pgdn']]]]]

Example

<source lang="python"> ju ..→

A Random PyMOL-generated Cover. See Covers.